RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 USF3Q68DE3 2245 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 IFNA5P01569 189 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 IGHV2-5P01817 119 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 MBPP02686 304 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-208ENST00000468300 SPP1P10451 314 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 NFYBP25208 207 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 ARF6P62330 175 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 DIAPH2-AS1Q14236 149 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 MRPL23Q16540 153 aaKnown RBP6.73□□□□□ -1.33
BRCA1-208ENST00000468300 IZUMO4Q1ZYL8 232 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM30BQ3MIR4 351 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 LRRC37A5PQ49AS3 106 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 C8orf31Q8N9H6 132 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 TCTEX1D2Q8WW35 142 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 ST6GALNAC6Q969X2 333 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 CCL19Q99731 98 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 PRO1933Q9H354 126 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 TNFSF18Q9UNG2 199 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 TSSC4Q9Y5U2 329 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-208ENST00000468300 CENPEQ02224 2701 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 ABCA2Q9BZC7 2435 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 ACTL6BO94805 426 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 PRB3Q04118 309 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-208ENST00000468300 IAH1Q2TAA2 248 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-208ENST00000468300 OR8G2PQ6IF36 304 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 HCP5Q6MZN7 132 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF66Q6ZN08 573 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 OR8B3Q8NGG8 313 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 GPR146Q96CH1 333 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 OR8B2Q96RD0 313 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 BPESC1Q9GZL8 116 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 TMED3Q9Y3Q3 217 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 DUXBA0A1W2PPF3 345 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 CYB5BO43169 146 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 ATP6V1FQ16864 119 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 LDLRAD2Q5SZI1 272 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF833PQ6ZTB9 187 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 HSPB11Q9Y547 144 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 LRRK2Q5S007 2527 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 APCP25054 2843 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 MSGN1A6NI15 193 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 DNASE2O00115 360 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-208ENST00000468300 S1PR2O95136 353 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 CT45A6P0DMU7 189 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 CT45A5P0DMU8 189 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 CT45A7P0DMV0 189 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 PVALBP20472 110 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-208ENST00000468300 GPR6P46095 362 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-208ENST00000468300 GPR12P47775 334 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 SRPXP78539 464 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 HNF4GQ14541 408 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 LINC00311Q8N616 119 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 HSD17B11Q8NBQ5 300 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 DMBX1Q8NFW5 382 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 OR13D1Q8NGV5 346 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 TIMD4Q96H15 378 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 PSMG3-AS1Q96PY0 264 aa6.72□□□□□ -1.33
BRCA1-208ENST00000468300 HSD17B10Q99714 261 aaKnown RBP6.72□□□□□ -1.33
BRCA1-208ENST00000468300 RCL1Q9Y2P8 373 aaKnown RBP6.72□□□□□ -1.33
BRCA1-208ENST00000468300 MALRD1Q5VYJ5 2156 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 USP9YO00507 2555 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-208ENST00000468300 LOC102724200A0A096LPH7 203 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-208ENST00000468300 PPIAL4CA0A0B4J2A2 164 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 J3QR06 171 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 DEDDO75618 318 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 IGLV1-47P01700 117 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 APOC3P02656 99 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 SNRPCP09234 159 aaKnown RBP6.71□□□□□ -1.33
BRCA1-208ENST00000468300 PPIAL4GP0DN37 164 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 VDAC1P21796 283 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 RAB7AP51149 207 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF137PP52743 207 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 MIDNQ504T8 468 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF695Q8IW36 515 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-208ENST00000468300 SMIM12Q96EX1 92 aa6.71□□□□□ -1.33
BRCA1-208ENST00000468300 SSBP3Q9BWW4 388 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-208ENST00000468300 LIN7CQ9NUP9 197 aaKnown RBP6.71□□□□□ -1.33
BRCA1-208ENST00000468300 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 KRBOX1C9JBD0 128 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 K7EPK0 472 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 RAB29O14966 203 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 RBP4P02753 201 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 COX6B1P14854 86 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 S100A11P31949 105 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 LPAR6P43657 344 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 PKIAP61925 76 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 FAM71E2Q8N5Q1 922 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 OR1S1Q8NH92 325 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 CLDND2Q8NHS1 167 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 LSM10Q969L4 123 aaKnown RBP6.71□□□□□ -1.34
BRCA1-208ENST00000468300 TSNAXQ99598 290 aaKnown RBP6.71□□□□□ -1.34
BRCA1-208ENST00000468300 TMEM133Q9H2Q1 129 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 PDZD2O15018 2839 aa6.71□□□□□ -1.34
BRCA1-208ENST00000468300 FXYD6-FXYD2A0A087WZ82 144 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 FAM74A7A6NL05 159 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 A8MXK9 166 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 TMEM50AO95807 157 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 CYCSP99999 105 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms