RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SULT1A4P0DMN0 295 aa8.8□□□□□ -1
VCP-204ENST00000466100 EGR2P11161 476 aaPredicted RBP8.8□□□□□ -1
VCP-204ENST00000466100 MAS1LP35410 378 aa8.8□□□□□ -1
VCP-204ENST00000466100 CRIP2P52943 208 aaPredicted RBP8.8□□□□□ -1
VCP-204ENST00000466100 CX3CL1P78423 397 aa8.8□□□□□ -1
VCP-204ENST00000466100 SRSF2Q01130 221 aaKnown RBP8.8□□□□□ -1
VCP-204ENST00000466100 SMCO1Q147U7 214 aa8.8□□□□□ -1
VCP-204ENST00000466100 PLGLAQ15195 96 aa8.8□□□□□ -1
VCP-204ENST00000466100 ZNF562Q6V9R5 426 aa8.8□□□□□ -1
VCP-204ENST00000466100 Q6ZSV7 163 aa8.8□□□□□ -1
VCP-204ENST00000466100 PRIMA1Q86XR5 153 aa8.8□□□□□ -1
VCP-204ENST00000466100 UXS1Q8NBZ7 420 aa8.8□□□□□ -1
VCP-204ENST00000466100 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
VCP-204ENST00000466100 OR10C1Q96KK4 312 aa8.8□□□□□ -1
VCP-204ENST00000466100 CLCC1Q96S66 551 aa8.8□□□□□ -1
VCP-204ENST00000466100 QTRT1Q9BXR0 403 aaKnown RBP8.8□□□□□ -1
VCP-204ENST00000466100 PRNDQ9UKY0 176 aa8.8□□□□□ -1
VCP-204ENST00000466100 STAB1Q9NY15 2570 aa8.79□□□□□ -1
VCP-204ENST00000466100 TEX22C9J3V5 150 aa8.79□□□□□ -1
VCP-204ENST00000466100 TRIM77I1YAP6 450 aa8.79□□□□□ -1
VCP-204ENST00000466100 ST8SIA3O43173 380 aa8.79□□□□□ -1
VCP-204ENST00000466100 SSNA1O43805 119 aa8.79□□□□□ -1
VCP-204ENST00000466100 SNAPC5O75971 98 aa8.79□□□□□ -1
VCP-204ENST00000466100 CXCL3P19876 107 aa8.79□□□□□ -1
VCP-204ENST00000466100 H2BFSP57053 126 aa8.79□□□□□ -1
VCP-204ENST00000466100 RRAS2P62070 204 aaPredicted RBP8.79□□□□□ -1
VCP-204ENST00000466100 IL15RAQ13261 267 aa8.79□□□□□ -1
VCP-204ENST00000466100 FCN2Q15485 313 aa8.79□□□□□ -1
VCP-204ENST00000466100 PDLIM3Q53GG5 364 aaPredicted RBP8.79□□□□□ -1
VCP-204ENST00000466100 C19orf54Q5BKX5 351 aa8.79□□□□□ -1
VCP-204ENST00000466100 OR11H7Q8NGC8 314 aa8.79□□□□□ -1
VCP-204ENST00000466100 OR4D5Q8NGN0 318 aa8.79□□□□□ -1
VCP-204ENST00000466100 SRSF12Q8WXF0 261 aaKnown RBP8.79□□□□□ -1
VCP-204ENST00000466100 TAF15Q92804 592 aaKnown RBP eCLIP8.79□□□□□ -1
VCP-204ENST00000466100 SPIN2AQ99865 258 aa8.79□□□□□ -1
VCP-204ENST00000466100 SPIN2BQ9BPZ2 258 aa8.79□□□□□ -1
VCP-204ENST00000466100 PRSS22Q9GZN4 317 aa8.79□□□□□ -1
VCP-204ENST00000466100 NDUFA4L2Q9NRX3 87 aa8.79□□□□□ -1
VCP-204ENST00000466100 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.79□□□□□ -1
VCP-204ENST00000466100 ZNF580Q9UK33 172 aa8.79□□□□□ -1
VCP-204ENST00000466100 ZNF257Q9Y2Q1 563 aa8.79□□□□□ -1
VCP-204ENST00000466100 TEX50A0A1B0GTY4 177 aa8.78□□□□□ -1
VCP-204ENST00000466100 A0A1B0GVG6 124 aa8.78□□□□□ -1
VCP-204ENST00000466100 GOSR2O14653 212 aa8.78□□□□□ -1
VCP-204ENST00000466100 ATP6V0E1O15342 81 aa8.78□□□□□ -1
VCP-204ENST00000466100 NDUFA7O95182 113 aa8.78□□□□□ -1
VCP-204ENST00000466100 IFNA21P01568 189 aa8.78□□□□□ -1
VCP-204ENST00000466100 IGF1P05019 195 aa8.78□□□□□ -1
VCP-204ENST00000466100 RPL27AP46776 148 aaKnown RBP8.78□□□□□ -1
VCP-204ENST00000466100 GNB1P62873 340 aa8.78□□□□□ -1
VCP-204ENST00000466100 FXYD3Q14802 87 aa8.78□□□□□ -1
VCP-204ENST00000466100 TNXAQ16473 311 aa8.78□□□□□ -1
VCP-204ENST00000466100 TMEM95Q3KNT9 176 aa8.78□□□□□ -1
VCP-204ENST00000466100 ASPHD1Q5U4P2 390 aa8.78□□□□□ -1
VCP-204ENST00000466100 ZBTB8BQ8NAP8 495 aaPredicted RBP8.78□□□□□ -1
VCP-204ENST00000466100 OR5B3Q8NH48 314 aa8.78□□□□□ -1
VCP-204ENST00000466100 OR4A16Q8NH70 328 aa8.78□□□□□ -1
VCP-204ENST00000466100 ARPC1AQ92747 370 aa8.78□□□□□ -1
VCP-204ENST00000466100 SERTAD4Q9NUC0 356 aa8.78□□□□□ -1
VCP-204ENST00000466100 MGAT4CQ9UBM8 478 aa8.78□□□□□ -1
VCP-204ENST00000466100 HSPB7Q9UBY9 170 aa8.78□□□□□ -1
VCP-204ENST00000466100 OR51B2Q9Y5P1 312 aa8.78□□□□□ -1
VCP-204ENST00000466100 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 FAM90A26D6RGX4 464 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 KCNAB3O43448 404 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 SIX6O95475 246 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 HSPE1P61604 102 aaKnown RBP8.77□□□□□ -1.01
VCP-204ENST00000466100 PRCDQ00LT1 54 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 TNFRSF9Q07011 255 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 SRSF4Q08170 494 aaKnown RBP8.77□□□□□ -1.01
VCP-204ENST00000466100 IAH1Q2TAA2 248 aaPredicted RBP8.77□□□□□ -1.01
VCP-204ENST00000466100 C9orf152Q5JTZ5 239 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 THOC7Q6I9Y2 204 aaKnown RBP8.77□□□□□ -1.01
VCP-204ENST00000466100 SLC35E3Q7Z769 313 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 OR1L8Q8NGR8 309 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 OR52E5Q8NH55 327 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 SGMS2Q8NHU3 365 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 GRPEL2Q8TAA5 225 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 WDR89Q96FK6 387 aaPredicted RBP8.77□□□□□ -1.01
VCP-204ENST00000466100 C2orf50Q96LR7 162 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 FAM103A1Q9BTL3 118 aaKnown RBP8.77□□□□□ -1.01
VCP-204ENST00000466100 COMMD5Q9GZQ3 224 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 MED28Q9H204 178 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 C16orf95Q9H693 158 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 PARP11Q9NR21 331 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 FKBP11Q9NYL4 201 aa8.77□□□□□ -1.01
VCP-204ENST00000466100 VWFP04275 2813 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 C5orf51A6NDU8 294 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 FAM25EA8MYX2 175 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 INS-IGF2F8WCM5 200 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 AP4M1O00189 453 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 ACTL6BO94805 426 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 CNIH1O95406 144 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 OPN1MWP04001 364 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 OPN1MW2P0DN77 364 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 OPN1MW3P0DN78 364 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 SPCS3P61009 180 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 ID3Q02535 119 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 CFHR3Q02985 330 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 WT1-ASQ06250 92 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms