RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PXDC1Q5TGL8 231 aa9.32□□□□□ -0.92
APTX-213ENST00000465003 PUSL1Q8N0Z8 303 aaKnown RBP9.32□□□□□ -0.92
APTX-213ENST00000465003 OR2A7Q96R45 310 aa9.32□□□□□ -0.92
APTX-213ENST00000465003 TBC1D24Q9ULP9 559 aa9.32□□□□□ -0.92
APTX-213ENST00000465003 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 A0A1B0GW64 132 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 RBFOX2O43251 390 aaKnown RBP eCLIP9.31□□□□□ -0.92
APTX-213ENST00000465003 KCNAB3O43448 404 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 HRASP01112 189 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 SERPINE2P07093 398 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 OR9G9P0C7N8 305 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 NQO2P16083 231 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 VDAC1P21796 283 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 NKX2-5P52952 324 aaPredicted RBP9.31□□□□□ -0.92
APTX-213ENST00000465003 RND3P61587 244 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 UNQ5815/PRO19632Q6UWF5 114 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 ZNF562Q6V9R5 426 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 TEX45Q8NA69 505 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 LRRC20Q8TCA0 184 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 SRSF12Q8WXF0 261 aaKnown RBP9.31□□□□□ -0.92
APTX-213ENST00000465003 KLK15Q9H2R5 256 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 PLEKHA2Q9HB19 425 aa9.31□□□□□ -0.92
APTX-213ENST00000465003 A0A0G2JRQ6 117 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 MSGN1A6NI15 193 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 CRYM-AS1A6NIL9 109 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 H0Y980 276 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 LYRM1O43325 122 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 PRH1P02810 166 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 IGF1P05019 195 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 RPLP1P05386 114 aaKnown RBP9.3□□□□□ -0.92
APTX-213ENST00000465003 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
APTX-213ENST00000465003 TAS2R31P59538 309 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 SUPT4H1P63272 117 aaKnown RBP9.3□□□□□ -0.92
APTX-213ENST00000465003 ASPHD1Q5U4P2 390 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 CCDC71LQ8N9Z2 235 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 OR5T1Q8NG75 326 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 MS4A10Q96PG2 267 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 FYTTD1Q96QD9 318 aaKnown RBP9.3□□□□□ -0.92
APTX-213ENST00000465003 PHB2Q99623 299 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 CCDC32Q9BV29 185 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 NAA60Q9H7X0 242 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 ZC4H2Q9NQZ6 224 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 PPP1R14DQ9NXH3 145 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 WNK1Q9H4A3 2382 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 ACTL6BO94805 426 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 IGKV1-5P01602 117 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 REG1AP05451 166 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 ERVK-16P61578 105 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 CFHR3Q02985 330 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 SURF2Q15527 256 aaPredicted RBP9.3□□□□□ -0.92
APTX-213ENST00000465003 SPINK9Q5DT21 86 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 SHISA2Q6UWI4 295 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 CD300LFQ8TDQ1 290 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 GLYATL2Q8WU03 294 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 SEC22AQ96IW7 307 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 OR5B12Q96R08 314 aa9.3□□□□□ -0.92
APTX-213ENST00000465003 PKD1L1Q8TDX9 2849 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 TCRBV4S1A1TA0A5B7 111 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 UPK1BO75841 260 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 NXPH3O95157 252 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 TSPAN15O95858 294 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 ANXA7P20073 488 aaKnown RBP9.29□□□□□ -0.92
APTX-213ENST00000465003 VAMP1P23763 118 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 PPIFP30405 207 aaKnown RBP9.29□□□□□ -0.92
APTX-213ENST00000465003 ECI1P42126 302 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 AKR1C2P52895 323 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 RAB25P57735 213 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 RPL8P62917 257 aaKnown RBP9.29□□□□□ -0.92
APTX-213ENST00000465003 RBMS2Q15434 407 aaKnown RBP9.29□□□□□ -0.92
APTX-213ENST00000465003 OR4X2Q8NGF9 303 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 TMEM167AQ8TBQ9 72 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 DUX3Q96PT4 197 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 COMMD9Q9P000 198 aa9.29□□□□□ -0.92
APTX-213ENST00000465003 TRAV6A0A075B6T7 132 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 CGB1A6NKQ9 187 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 NDUFB6O95139 128 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 IL6RP08887 468 aaPredicted RBP9.28□□□□□ -0.92
APTX-213ENST00000465003 PF4V1P10720 104 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 AREGP15514 252 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 HTR2BP41595 481 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 PPP1R1AQ13522 171 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 SGPP2Q8IWX5 399 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 MMD2Q8IY49 270 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 OR10W1Q8NGF6 305 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 VSTM2AQ8TAG5 236 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 HINT2Q9BX68 163 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 TMEM222Q9H0R3 208 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 ZNF355PQ9NSJ1 428 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 NUBP2Q9Y5Y2 271 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 UPK2O00526 184 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 RBMXL2O75526 392 aaKnown RBP9.28□□□□□ -0.92
APTX-213ENST00000465003 HLA-GP17693 338 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 UCP1P25874 307 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 SLC35B1P78383 322 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms