RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 AASSQ9UDR5 926 aa3.69□□□□□ -1.82
BRCA1-206ENST00000461574 RABL2BQ9UNT1 228 aa3.69□□□□□ -1.82
BRCA1-206ENST00000461574 RPL36Q9Y3U8 105 aaKnown RBP3.69□□□□□ -1.82
BRCA1-206ENST00000461574 AP4S1Q9Y587 144 aa3.69□□□□□ -1.82
BRCA1-206ENST00000461574 TRBV7-1A0A0A6YYK4 115 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 TRAV10A0A0B4J240 114 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 IGHV3-35A0A0C4DH35 117 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 TRBV5-5A0A0J9YX44 114 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 HMX3A6NHT5 357 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 EI24O14681 340 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 TSPAN4O14817 238 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 BET1O15155 118 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 NAPSAO96009 420 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 CA1P00915 261 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 CD1AP06126 327 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 LIMS3P0CW19 117 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 LIMS4P0CW20 117 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 SAA1P0DJI8 122 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 HIST1H1BP16401 226 aaKnown RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 SRMP19623 302 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 MAPK3P27361 379 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 HTR2CP28335 458 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 SERPINB10P48595 397 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 PSMD7P51665 324 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 RPS27AP62979 156 aaKnown RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 TMEM187Q14656 261 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 CDK10Q15131 360 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 ODF3L2Q3SX64 289 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 C1orf146Q5VVC0 180 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 OR10K2Q6IF99 312 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 ZNF880Q6PDB4 577 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 PLET1Q6UQ28 207 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 UNQ9165/PRO28630Q6UXU0 137 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 C19orf35Q6ZS72 473 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 CEACAM19Q7Z692 300 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 APRG1Q8IVJ8 170 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 TTC9CQ8N5M4 171 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 ZFP41Q8N8Y5 198 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 SETD9Q8NE22 299 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 OR10J5Q8NHC4 309 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 OSR1Q8TAX0 266 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 PTX4Q96A99 478 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 CENPNQ96H22 339 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 ADTRPQ96IZ2 230 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 SLC29A1Q99808 456 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 UQCC2Q9BRT2 126 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 GINS4Q9BRT9 223 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 NICN1Q9BSH3 213 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 HDHD3Q9BSH5 251 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 URM1Q9BTM9 101 aaKnown RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 C20orf24Q9BUV8 137 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 C5orf66Q9H5L9 145 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 ZNF430Q9H8G1 570 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 SDHAF2Q9NX18 166 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 BABAM2Q9NXR7 383 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 AK3Q9UIJ7 227 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 MRPS7Q9Y2R9 242 aaKnown RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 HERC1Q15751 4861 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 DYNC1H1Q14204 4646 aaKnown RBP3.68□□□□□ -1.82
BRCA1-206ENST00000461574 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
BRCA1-206ENST00000461574 IGKV3-7A0A075B6H7 116 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 IGLV2-18A0A075B6J9 118 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 IRGMA1A4Y4 181 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 MFSD2BA6NFX1 497 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 SRRM4A7MD48 611 aaKnown RBP3.67□□□□□ -1.82
BRCA1-206ENST00000461574 NPIPB5A8MRT5 1133 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 C16orf90A8MZG2 172 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 TRDCB7Z8K6 153 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 RTL8CO15255 209 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 OGG1O15527 345 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 CYB5BO43169 146 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 FCGR3BO75015 233 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 S1PR2O95136 353 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 IFNA10P01566 189 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 ALPLP05186 524 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 REG1AP05451 166 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 CLEC3BP05452 202 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 RPA2P15927 270 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 GALP22466 123 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 CRHBPP24387 322 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 HLA-DMBP28068 263 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 RPL27AP46776 148 aaKnown RBP3.67□□□□□ -1.82
BRCA1-206ENST00000461574 TFPI2P48307 235 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 ETV1P50549 477 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 CMC4P56277 68 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-206ENST00000461574 OR2B11Q5JQS5 317 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 RBM48Q5RL73 367 aaKnown RBP3.67□□□□□ -1.82
BRCA1-206ENST00000461574 TTC23Q5W5X9 447 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 PVRIGQ6DKI7 326 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 Q6ZTC4 211 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 KCTD9Q7L273 389 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 POM121L12Q8N7R1 296 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 OR6M1Q8NGM8 313 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 OR4A4PQ8NGN8 299 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 VSTM2AQ8TAG5 236 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 CMTM3Q96MX0 182 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 DERL3Q96Q80 235 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 CMSS1Q9BQ75 279 aaKnown RBP3.67□□□□□ -1.82
BRCA1-206ENST00000461574 NDUFAF3Q9BU61 184 aa3.67□□□□□ -1.82
BRCA1-206ENST00000461574 KCNK15Q9H427 330 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms