RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 OR4A47Q6IF82 309 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 GPR141Q7Z602 305 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 ZBTB34Q8NCN2 500 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 EEF1AKMT3Q96AZ1 226 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 SLC2A8Q9NY64 477 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 E7EUB6 86 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 TPPPO94811 219 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 GABARAPO95166 117 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 OR2C1O95371 312 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 IFNA6P05013 189 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 MYOD1P15172 320 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 PSMB6P28072 239 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 BRWD1-AS2P59051 145 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 MSMO1Q15800 293 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 HAGHQ16775 308 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 CLEC19AQ6UXS0 136 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 SAMD12Q8N8I0 201 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 OR51H1Q8NH63 302 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 OR4A5Q8NH83 315 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 BET1LQ9NYM9 111 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 EHFQ9NZC4 300 aa11.93□□□□□ -0.5
CHCHD3-204ENST00000457942 NDUFB8O95169 186 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 HIST1H1BP16401 226 aaKnown RBP11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 CTF1Q16619 201 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 CROCCP3Q8IVE0 287 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 DMBX1Q8NFW5 382 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 SLC25A46Q96AG3 418 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 NEURL2Q9BR09 285 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 THAP7Q9BT49 309 aaPredicted RBP11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 COMMD5Q9GZQ3 224 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 COMMD3Q9UBI1 195 aa11.92□□□□□ -0.5
CHCHD3-204ENST00000457942 A0A1B0GW64 132 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 ZNF320A2RRD8 509 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 C2orf70A6NJV1 201 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 RBFOX2O43251 390 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 HPRT1P00492 218 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 EIF4EP06730 217 aaKnown RBP11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 FOLR2P14207 255 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 RPA2P15927 270 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 NQO2P16083 231 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 EDN2P20800 178 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 TAS2R31P59538 309 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 ERVK-16P61578 105 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 UBE2NLQ5JXB2 153 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 TMEM69Q5SWH9 247 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 ZNF818PQ6ZRF7 136 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 CLVS1Q8IUQ0 354 aaPredicted RBP11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 LAX1Q8IWV1 398 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 BORCS5Q969J3 196 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 CCDC140Q96MF4 163 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 SELENOKQ9Y6D0 94 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 CEPT1Q9Y6K0 416 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 FRAS1Q86XX4 4008 aa11.91□□□□□ -0.5
CHCHD3-204ENST00000457942 XRCC3O43542 346 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 TMEM127O75204 238 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 S1PR2O95136 353 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 CRYGCP07315 174 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 CTRB1P17538 263 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 FAM106AQ4KMX7 169 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 CTRB2Q6GPI1 263 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 GIMAP1Q8WWP7 306 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 ZC4H2Q9NQZ6 224 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 TMEM140Q9NV12 185 aa11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 TECRQ9NZ01 308 aaKnown RBP11.9□□□□□ -0.5
CHCHD3-204ENST00000457942 LGALS9O00182 355 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 UPK2O00526 184 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 RLN1P04808 185 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 CD7P09564 240 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 MECP2P51608 486 aaKnown RBP11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 OR2B8PP59922 312 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 SPCS2Q15005 226 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 DEFB125Q8N687 156 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 OR5H2Q8NGV7 314 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 CD300LFQ8TDQ1 290 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 CXorf58Q96LI9 332 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 ZNF2Q9BSG1 426 aaPredicted RBP11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 RETNQ9HD89 108 aa11.89□□□□□ -0.51
CHCHD3-204ENST00000457942 HERC2O95714 4834 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 IGLV11-55A0A075B6I3 123 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 TRBV7-1A0A0A6YYK4 115 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 TRAV3A0A0B4J244 114 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 CYB5BO43169 146 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 HPGDSO60760 199 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 PMP2P02689 132 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 GPR183P32249 361 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 RFX2P48378 723 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 TAS2R46P59540 309 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 TAS2R20P59543 309 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 SLC16A13Q7RTY0 426 aa11.88□□□□□ -0.51
CHCHD3-204ENST00000457942 GPHB5Q86YW7 130 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms