RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 MOB3AQ96BX8 217 aa13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 CMTM3Q96MX0 182 aa13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 SRSF8Q9BRL6 282 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 FUNDC2Q9BWH2 189 aa13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 C19orf73Q9NVV2 129 aa13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 COMMD9Q9P000 198 aa13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 COMMD3Q9UBI1 195 aa13.19□□□□□ -0.3
CLTCL1-203ENST00000449918 PPP5D1E7EU14 171 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 PGLYRP1O75594 196 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 NDUFB8O95169 186 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 ERVK-16P61578 105 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 KLK9Q2XQG4 91 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 DYNLRB2Q8TF09 96 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 CXorf58Q96LI9 332 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 TUBA4BQ9H853 241 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 TMEM140Q9NV12 185 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 KLK9Q9UKQ9 250 aa13.18□□□□□ -0.3
CLTCL1-203ENST00000449918 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 LGALS9O00182 355 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 CYB5BO43169 146 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 S1PR2O95136 353 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 OR2C1O95371 312 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 APOA1P02647 267 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 REG1AP05451 166 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 MYOD1P15172 320 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 F2RP25116 425 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 ARL3P36405 182 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 NCS1P62166 190 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 CLEC19AQ6UXS0 136 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 GPHB5Q86YW7 130 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 THYN1Q9P016 225 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
CLTCL1-203ENST00000449918 TRAV3A0A0B4J244 114 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 CGB1A6NKQ9 187 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 IGHV3-23P01764 117 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 HLA-AP01891 365 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 RLN1P04808 185 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 EIF4EP06730 217 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 S100GP29377 79 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 HRH1P35367 487 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 RORCP51449 518 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 VBP1P61758 197 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 FAM106AQ4KMX7 169 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 THOC7Q6I9Y2 204 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 LPCAT3Q6P1A2 487 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 LAX1Q8IWV1 398 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 DGCR14Q96DF8 476 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 TM2D3Q9BRN9 247 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 THAP7Q9BT49 309 aaPredicted RBP13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 QTRT1Q9BXR0 403 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 SCPEP1Q9HB40 452 aa13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 TECRQ9NZ01 308 aaKnown RBP13.16□□□□□ -0.3
CLTCL1-203ENST00000449918 IGLV11-55A0A075B6I3 123 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 IGLC7A0M8Q6 106 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 C2orf70A6NJV1 201 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 GPR31O00270 319 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 FOLR2P14207 255 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 TSPAN5P62079 268 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 DEFB114Q30KQ6 69 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 HSD17B13Q7Z5P4 300 aaPredicted RBP13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 MUC7Q8TAX7 377 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 GPX8Q8TED1 209 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 S4R3C0 116 aa13.15□□□□□ -0.3
CLTCL1-203ENST00000449918 ZNF320A2RRD8 509 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 MARCH11A6NNE9 402 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 SNAPC5O75971 98 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 CLEC3BP05452 202 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 TRAPPC2P0DI81 140 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 TRAPPC2BP0DI82 140 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 RPA2P15927 270 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 LPAR6P43657 344 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 MZT2AQ6P582 158 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 SNX29P2Q8IUI4 249 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 CADM3Q8N126 398 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 OR1L8Q8NGR8 309 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 FCAMRQ8WWV6 532 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 SLC2A8Q9NY64 477 aa13.14□□□□□ -0.31
CLTCL1-203ENST00000449918 KRASP01116 189 aa13.13□□□□□ -0.31
CLTCL1-203ENST00000449918 CBLN1P23435 193 aa13.13□□□□□ -0.31
CLTCL1-203ENST00000449918 RCVRNP35243 200 aa13.13□□□□□ -0.31
CLTCL1-203ENST00000449918 AP3S1Q92572 193 aa13.13□□□□□ -0.31
CLTCL1-203ENST00000449918 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 HPGDSO60760 199 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 TPPPO94811 219 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 OR13C7P0DN81 318 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 ELK1P19419 428 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 PTBP1P26599 531 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 CD81P60033 236 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 GUCA2BQ16661 112 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 HAGHQ16775 308 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 GDPD1Q8N9F7 314 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms