RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ACSM6Q6P461 480 aa11.29□□□□□ -0.6
SYNGAP1-204ENST00000449372 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
SYNGAP1-204ENST00000449372 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
SYNGAP1-204ENST00000449372 E9PLN8 166 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 CLDN1O95832 211 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 NTF4P34130 210 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 TIMP3P35625 211 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 NINJ1Q92982 152 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 IL36BQ9NZH7 164 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 POLDIP2Q9Y2S7 368 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 IGKV1-27A0A075B6S5 117 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 IGKV1-12A0A0C4DH73 117 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 SLC17A3O00476 420 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 PDE6DO43924 150 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 CXCL13O43927 109 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 IGKV1D-12P01611 117 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 RFPL3SP0C7P2 107 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 CCNOP22674 350 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 RSPO1Q2MKA7 263 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 ZNF324BQ6AW86 544 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 CELA3BP08861 270 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 AZU1P20160 251 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 OTX2P32243 289 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 HTD2P86397 168 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 CHRDL1Q9BU40 450 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 STRADBQ9C0K7 418 aa11.28□□□□□ -0.6
SYNGAP1-204ENST00000449372 PINLYPA6NC86 204 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 H0YJW9 148 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 HAND1O96004 215 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 SCGB1A1P11684 91 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 BCL3P20749 454 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 IZUMO4Q1ZYL8 232 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 TMEM45BQ96B21 275 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 CHODLQ9H9P2 273 aa11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.6
SYNGAP1-204ENST00000449372 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 C5orf63A6NC05 138 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 CD5LO43866 347 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 RBMXL2O75526 392 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 TSKUQ8WUA8 353 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 OR51B2Q9Y5P1 312 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 ZFHX4Q86UP3 3567 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 SCTP09683 121 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 DTX1Q86Y01 620 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 LINC00470Q9BZP3 86 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 PKIBQ9C010 78 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 GTSF1LQ9H1H1 148 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 TRAPPC2LQ9UL33 140 aa11.27□□□□□ -0.61
SYNGAP1-204ENST00000449372 A0A0G2JRQ6 117 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 GPR6P46095 362 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 ATP5G3P48201 142 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 RHOBP62745 196 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 SFXN3Q9BWM7 321 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 GNB1LQ9BYB4 327 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 LGALS4P56470 323 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 IL1F10Q8WWZ1 152 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 RTL8AQ9BWD3 113 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 RTTNQ86VV8 2226 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 NPIPB11E5RHQ5 1161 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 CDIPTO14735 213 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 GPM6AP51674 278 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 CRYBA4P53673 196 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 GTF2H5Q6ZYL4 71 aa11.26□□□□□ -0.61
SYNGAP1-204ENST00000449372 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 SPINK4O60575 86 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 SRIP30626 198 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 RAB9AP51151 201 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 IGFBP7Q16270 282 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 KRTAP27-1Q3LI81 207 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 PET117Q6UWS5 81 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 CELSR3Q9NYQ7 3312 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 PPIAL4EA0A075B759 164 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 PPIAL4CA0A0B4J2A2 164 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 PPIAL4DF5H284 164 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 PPIAL4FP0DN26 164 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 PLGLB1Q02325 96 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 ASPMQ8IZT6 3477 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 NEURL1O76050 574 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 GDF1P27539 372 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 CA7P43166 264 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 OR10D3Q8NH80 312 aa11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-204ENST00000449372 A0A1W2PPV4 95 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 PSG2P11465 335 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 PDCD1Q15116 288 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 YRDCQ86U90 279 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 OR8I2Q8N0Y5 310 aa11.24□□□□□ -0.61
SYNGAP1-204ENST00000449372 ZNF837Q96EG3 531 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms