RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 OR1S1Q8NH92 325 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 RBMXL1Q96E39 390 aaKnown RBP10.06□□□□□ -0.8
SCLT1-202ENST00000439369 FYTTD1Q96QD9 318 aaKnown RBP10.06□□□□□ -0.8
SCLT1-202ENST00000439369 PDCD10Q9BUL8 212 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 NMES1Q9C002 83 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 PRSS22Q9GZN4 317 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 ZFP57Q9NU63 452 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 HSPB7Q9UBY9 170 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 OR51B2Q9Y5P1 312 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 C13orf42A0A1B0GVH6 325 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 INS-IGF2F8WCM5 200 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 FCN1O00602 326 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 CCSO14618 274 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 CA2P00918 260 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 GIPP09681 153 aaPredicted RBP10.05□□□□□ -0.8
SCLT1-202ENST00000439369 RPL27AP46776 148 aaKnown RBP10.05□□□□□ -0.8
SCLT1-202ENST00000439369 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
SCLT1-202ENST00000439369 SPCS3P61009 180 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 PJVKQ0ZLH3 352 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 FCN2Q15485 313 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 TNXAQ16473 311 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 IZUMO4Q1ZYL8 232 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 C2orf68Q2NKX9 166 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 OR4D5Q8NGN0 318 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 OR10C1Q96KK4 312 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 TMEM68Q96MH6 324 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 QTRT1Q9BXR0 403 aaKnown RBP10.05□□□□□ -0.8
SCLT1-202ENST00000439369 TNFRSF19Q9NS68 423 aa10.05□□□□□ -0.8
SCLT1-202ENST00000439369 FN1P02751 2386 aaKnown RBP10.05□□□□□ -0.8
SCLT1-202ENST00000439369 IGHV7-81A0A0B4J1V7 117 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 TEX50A0A1B0GTY4 177 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 MPTX1A8MV57 137 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 FAM25EA8MYX2 175 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 ST8SIA3O43173 380 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 MED6O75586 246 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 CNIH1O95406 144 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 IGF1P05019 195 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 CRYBA1P05813 215 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 H2BFSP57053 126 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 OR2B8PP59922 312 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 SSBP2P81877 361 aaPredicted RBP10.04□□□□□ -0.8
SCLT1-202ENST00000439369 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 ID3Q02535 119 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 TNFRSF9Q07011 255 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 IL15RAQ13261 267 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 FXYD3Q14802 87 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 SLC35E3Q7Z769 313 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 SRSF12Q8WXF0 261 aaKnown RBP10.04□□□□□ -0.8
SCLT1-202ENST00000439369 ARPC1AQ92747 370 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 CLCC1Q96S66 551 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 ZNF436Q9C0F3 470 aaPredicted RBP10.04□□□□□ -0.8
SCLT1-202ENST00000439369 NDUFA4L2Q9NRX3 87 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 NSG2Q9Y328 171 aa10.04□□□□□ -0.8
SCLT1-202ENST00000439369 A0A1W2PN81 502 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 FAM181BA6NEQ2 426 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 AP4M1O00189 453 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 TSPAN9O75954 239 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 NDUFA7O95182 113 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 IFNA17P01571 189 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 CXCL3P19876 107 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 CHRNA7P36544 502 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 NKX2-1P43699 371 aaPredicted RBP10.03□□□□□ -0.8
SCLT1-202ENST00000439369 BCAP31P51572 246 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 RAP2BP61225 183 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 BLCAPP62952 87 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 SGMS2Q8NHU3 365 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 DUX5Q96PT3 197 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 CIB3Q96Q77 187 aaPredicted RBP10.03□□□□□ -0.8
SCLT1-202ENST00000439369 HSPB9Q9BQS6 159 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 GSKIPQ9P0R6 139 aa10.03□□□□□ -0.8
SCLT1-202ENST00000439369 MXRA5Q9NR99 2828 aa10.02□□□□□ -0.8
SCLT1-202ENST00000439369 SIX6O95475 246 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 PET100P0DJ07 73 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 ATP5IP56385 69 aaPredicted RBP10.02□□□□□ -0.81
SCLT1-202ENST00000439369 GNB1P62873 340 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 TMEM267Q0VDI3 215 aaPredicted RBP10.02□□□□□ -0.81
SCLT1-202ENST00000439369 AKIRIN2Q53H80 203 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 CXorf66Q5JRM2 361 aaPredicted RBP10.02□□□□□ -0.81
SCLT1-202ENST00000439369 GON7Q9BXV9 100 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 ZNF702PQ9H963 129 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 PLEKHA3Q9HB20 300 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 MTORP42345 2549 aa10.02□□□□□ -0.81
SCLT1-202ENST00000439369 IGLC7A0M8Q6 106 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 MSGN1A6NI15 193 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 TEX22C9J3V5 150 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 SYNGR2O43760 224 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 MBPP02686 304 aaPredicted RBP10.01□□□□□ -0.81
SCLT1-202ENST00000439369 TAS2R30P59541 319 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 NDPQ00604 133 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 FGL1Q08830 312 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 C9orf152Q5JTZ5 239 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 C10orf55Q5SWW7 151 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 GRPEL2Q8TAA5 225 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 RAB40CQ96S21 281 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 ENY2Q9NPA8 101 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms