RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 OR4F5Q8NH21 305 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 ZNF714Q96N38 554 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 OR4F4Q96R69 305 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 TCEAL7Q9BRU2 100 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 FKBP11Q9NYL4 201 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 RALYQ9UKM9 306 aaKnown RBP11.23□□□□□ -0.61
THBS3-202ENST00000428962 OR51B2Q9Y5P1 312 aa11.23□□□□□ -0.61
THBS3-202ENST00000428962 CFAP47Q6ZTR5 3102 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 FNDC10F2Z333 226 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 AP4M1O00189 453 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 MMP23AO75900 390 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 APOA2P02652 100 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 OPN1MWP04001 364 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 OPN1MW2P0DN77 364 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 OPN1MW3P0DN78 364 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
THBS3-202ENST00000428962 RAB31Q13636 194 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 ZNF674Q2M3X9 581 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 LRRC10Q5BKY1 277 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 NEIL1Q96FI4 390 aaPredicted RBP11.22□□□□□ -0.61
THBS3-202ENST00000428962 GGTLC1Q9BX51 225 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 PRORYQ9H606 182 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 PLEKHA3Q9HB20 300 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 DYNLRB1Q9NP97 96 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 TMEM106BQ9NUM4 274 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 LAMA5O15230 3695 aa11.22□□□□□ -0.61
THBS3-202ENST00000428962 UPK2O00526 184 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 ATXN7O15265 892 aaPredicted RBP11.21□□□□□ -0.61
THBS3-202ENST00000428962 NDUFB3O43676 98 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 EIF3GO75821 320 aaKnown RBP eCLIP11.21□□□□□ -0.61
THBS3-202ENST00000428962 IGHV2-5P01817 119 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 CT45A6P0DMU7 189 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 CT45A5P0DMU8 189 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 CT45A7P0DMV0 189 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 ERVFRD-1P60508 538 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 ZNF343Q6P1L6 599 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
THBS3-202ENST00000428962 C12orf57Q99622 126 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 MGST2Q99735 147 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 VKORC1Q9BQB6 163 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 PARLQ9H300 379 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 PXMP4Q9Y6I8 212 aa11.21□□□□□ -0.61
THBS3-202ENST00000428962 DOCK11Q5JSL3 2073 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 PDE6DO43924 150 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 PAGE4O60829 102 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 CXCL1P09341 107 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 MEOX2P50222 304 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 PRCDQ00LT1 54 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 FABP9Q0Z7S8 132 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 ADIRFQ15847 76 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 PRR30Q53SZ7 412 aaPredicted RBP11.21□□□□□ -0.62
THBS3-202ENST00000428962 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 TEPPQ6URK8 271 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 OSR1Q8TAX0 266 aaPredicted RBP11.21□□□□□ -0.62
THBS3-202ENST00000428962 RNASE6Q93091 150 aaKnown RBP11.21□□□□□ -0.62
THBS3-202ENST00000428962 WFIKKN1Q96NZ8 548 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 BET1LQ9NYM9 111 aa11.21□□□□□ -0.62
THBS3-202ENST00000428962 TGIF2-C20orf24A0A0A6YYL0 155 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 C11orf94C9JXX5 98 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 J3QR06 171 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 S100A9P06702 114 aaKnown RBP11.2□□□□□ -0.62
THBS3-202ENST00000428962 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
THBS3-202ENST00000428962 SMIM6P0DI80 62 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 CASP6P55212 293 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 KIAA0141Q14154 515 aaPredicted RBP11.2□□□□□ -0.62
THBS3-202ENST00000428962 BSXQ3C1V8 233 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 NCMAPQ5T1S8 102 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 C8orf31Q8N9H6 132 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 OR5B3Q8NH48 314 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 CCL17Q92583 94 aa11.2□□□□□ -0.62
THBS3-202ENST00000428962 LSM4Q9Y4Z0 139 aaKnown RBP11.2□□□□□ -0.62
THBS3-202ENST00000428962 DSPP15924 2871 aaKnown RBP11.2□□□□□ -0.62
THBS3-202ENST00000428962 FAM208BQ5VWN6 2430 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 SHISA9B4DS77 424 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 F6UZH7 168 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 YIF1AO95070 293 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 VENTXO95231 258 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 CXorf1O96002 111 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 CA2P00918 260 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 TMEM200BQ69YZ2 307 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 NANPQ8TBE9 248 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 H1FXQ92522 213 aaKnown RBP11.19□□□□□ -0.62
THBS3-202ENST00000428962 FAM210BQ96KR6 192 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 HINT2Q9BX68 163 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 CHD6Q8TD26 2715 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 MIC13Q5XKP0 118 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 ZCCHC24Q8N2G6 241 aaKnown RBP11.19□□□□□ -0.62
THBS3-202ENST00000428962 GATAD1Q8WUU5 269 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 KAAG1Q9UBP8 84 aa11.19□□□□□ -0.62
THBS3-202ENST00000428962 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 TRBV24-1A0A075B6N3 115 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms