RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 BSXQ3C1V8 233 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 LDLRAD2Q5SZI1 272 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 C9orf139Q6ZV77 190 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 SSX9Q7RTT3 188 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 PPP1R27Q86WC6 154 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 OR1S2Q8NGQ3 325 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 SCARB1Q8WTV0 552 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 AJUBAQ96IF1 538 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 ZNF471Q9BX82 626 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-209ENST00000428574 MAGT1Q9H0U3 335 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 MEGF9Q9H1U4 602 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 PLEKHA3Q9HB20 300 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 ENY2Q9NPA8 101 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 NDUFA4L2Q9NRX3 87 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 PLA2G2EQ9NZK7 142 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 C1RLQ9NZP8 487 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 KIAA1456Q9P272 454 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 FBXL17Q9UF56 701 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 SIGLEC9Q9Y336 463 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 TENM4Q6N022 2769 aa7.29□□□□□ -1.24
NR1I3-209ENST00000428574 PTPN13Q12923 2485 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 FBN2P35556 2912 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 HELZ2Q9BYK8 2649 aaKnown RBP7.28□□□□□ -1.24
NR1I3-209ENST00000428574 FBP1P09467 338 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 OR8U8P0C7N1 319 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 IGHV4-31P0DP07 118 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 HOXA1P49639 335 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-209ENST00000428574 F2RL1P55085 397 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 OR2B8PP59922 312 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 RAB11AP62491 216 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 LHFPL4Q7Z7J7 247 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 VKORC1L1Q8N0U8 176 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 ZNF114Q8NC26 417 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-209ENST00000428574 EAF1Q96JC9 268 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-209ENST00000428574 ATP5SQ99766 215 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 C7orf69Q9H7B7 122 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 HEYLQ9NQ87 328 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-209ENST00000428574 CYTL1Q9NRR1 136 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 HILPDAQ9Y5L2 63 aa7.28□□□□□ -1.24
NR1I3-209ENST00000428574 TRAV3A0A0B4J244 114 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 TEX50A0A1B0GTY4 177 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 FAM24AA6NFZ4 105 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 RNF223E7ERA6 249 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 SLC25A17O43808 307 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 MPDU1O75352 247 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 ACTL6BO94805 426 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 FSHBP01225 129 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 SEC11BP0C7V7 166 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 IAPPP10997 89 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 RAB5CP51148 216 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 DLX1P56177 255 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 EXOSC2Q13868 293 aaKnown RBP7.27□□□□□ -1.25
NR1I3-209ENST00000428574 MMDQ15546 238 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 SSX2Q16385 188 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 C5orf64Q2M2E5 130 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 VWC2Q2TAL6 325 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 C2orf83Q53S99 150 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 SPANXN5Q5MJ07 72 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 CYB5R2Q6BCY4 276 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 C16orf82Q7Z2V1 217 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 SLC24A4Q8NFF2 622 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 Q96MF0 132 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 GINS3Q9BRX5 216 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 SLC25A32Q9H2D1 315 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 ZNF430Q9H8G1 570 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-209ENST00000428574 METTL1Q9UBP6 276 aaKnown RBP7.27□□□□□ -1.25
NR1I3-209ENST00000428574 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 YLPM1P49750 1951 aaKnown RBP7.27□□□□□ -1.25
NR1I3-209ENST00000428574 NAV2Q8IVL1 2488 aa7.27□□□□□ -1.25
NR1I3-209ENST00000428574 TRAV40A0A0B4J280 105 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 C15orf62A8K5M9 175 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 M0QZK8 103 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 CORTO00230 105 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 FGF16O43320 207 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 IFNA5P01569 189 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 HLA-DRB1P01911 266 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 NPY1RP25929 384 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 RPL27AP46776 148 aaKnown RBP7.26□□□□□ -1.25
NR1I3-209ENST00000428574 SUB1P53999 127 aaKnown RBP eCLIP7.26□□□□□ -1.25
NR1I3-209ENST00000428574 RAB14P61106 215 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 DLK1P80370 383 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 ERHP84090 104 aaKnown RBP7.26□□□□□ -1.25
NR1I3-209ENST00000428574 NHLH2Q02577 135 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 SLC38A11Q08AI6 406 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 CLLU1Q5K131 121 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 PVRIGQ6DKI7 326 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 ZNF562Q6V9R5 426 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 LILRB2Q8N423 598 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 OR5C1Q8NGR4 320 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 RNASEH2CQ8TDP1 164 aaKnown RBP7.26□□□□□ -1.25
NR1I3-209ENST00000428574 OR4C12Q96R67 309 aa7.26□□□□□ -1.25
NR1I3-209ENST00000428574 TMEM147Q9BVK8 224 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms