RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 NAA50Q9GZZ1 169 aaKnown RBP14.06□□□□□ -0.16
GPC1-205ENST00000427506 TMEM140Q9NV12 185 aa14.06□□□□□ -0.16
GPC1-205ENST00000427506 COMMD9Q9P000 198 aa14.06□□□□□ -0.16
GPC1-205ENST00000427506 TNCP24821 2201 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 TRAV3A0A0B4J244 114 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 GPR31O00270 319 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 CRYGCP07315 174 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 CSN3P07498 182 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 FRMD6-AS1P0C7T7 363 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 SMIM18P0DKX4 95 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 HIST1H1BP16401 226 aaKnown RBP14.05□□□□□ -0.16
GPC1-205ENST00000427506 F2RP25116 425 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 POU2AF1Q16633 256 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 GPR107Q5VW38 600 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 AP3S1Q92572 193 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 FXYD6Q9H0Q3 95 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 COL7A1Q02388 2944 aa14.05□□□□□ -0.16
GPC1-205ENST00000427506 PPP5D1E7EU14 171 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 GABARAPO95166 117 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 NDUFB8O95169 186 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 IGHV3-23P01764 117 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 CTRB1P17538 263 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 S100GP29377 79 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 RCVRNP35243 200 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 LPAR6P43657 344 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 OR2B8PP59922 312 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 CTRB2Q6GPI1 263 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 SBSPONQ8IVN8 264 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 EEF1AKMT3Q96AZ1 226 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 FANCD2OSQ96PS1 177 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 S4R3C0 116 aa14.04□□□□□ -0.16
GPC1-205ENST00000427506 CGB1A6NKQ9 187 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 MARCH11A6NNE9 402 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 GGCTO75223 188 aaKnown RBP14.03□□□□□ -0.16
GPC1-205ENST00000427506 ZNF182P17025 639 aaPredicted RBP14.03□□□□□ -0.16
GPC1-205ENST00000427506 CTF1Q16619 201 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 PHLDA2Q53GA4 152 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 RNASE12Q5GAN4 147 aaKnown RBP14.03□□□□□ -0.16
GPC1-205ENST00000427506 LCN12Q6JVE5 192 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 LPCAT3Q6P1A2 487 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 CLEC19AQ6UXS0 136 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 SGPP2Q8IWX5 399 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 DGCR14Q96DF8 476 aaKnown RBP14.03□□□□□ -0.16
GPC1-205ENST00000427506 MRPS26Q9BYN8 205 aaKnown RBP14.03□□□□□ -0.16
GPC1-205ENST00000427506 SIGLEC8Q9NYZ4 499 aa14.03□□□□□ -0.16
GPC1-205ENST00000427506 SORL1Q92673 2214 aa14.02□□□□□ -0.16
GPC1-205ENST00000427506 OR2C1O95371 312 aa14.02□□□□□ -0.17
GPC1-205ENST00000427506 KRASP01116 189 aa14.02□□□□□ -0.17
GPC1-205ENST00000427506 HLA-AP01891 365 aaKnown RBP14.02□□□□□ -0.17
GPC1-205ENST00000427506 ARL3P36405 182 aa14.02□□□□□ -0.17
GPC1-205ENST00000427506 Q8N402 240 aa14.02□□□□□ -0.17
GPC1-205ENST00000427506 FCAMRQ8WWV6 532 aa14.02□□□□□ -0.17
GPC1-205ENST00000427506 QTRT1Q9BXR0 403 aaKnown RBP14.02□□□□□ -0.17
GPC1-205ENST00000427506 TRAPPC2P0DI81 140 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 TRAPPC2BP0DI82 140 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 IGHV4-30-4P0DP06 118 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 GPR141Q7Z602 305 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 GTSCR1Q86UQ5 136 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 Q8N1Y9 231 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 DYNLRB2Q8TF09 96 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 CXorf58Q96LI9 332 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 SRSF8Q9BRL6 282 aaKnown RBP14.01□□□□□ -0.17
GPC1-205ENST00000427506 HINT2Q9BX68 163 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 THYN1Q9P016 225 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 EXTL2Q9UBQ6 330 aa14.01□□□□□ -0.17
GPC1-205ENST00000427506 IGLV11-55A0A075B6I3 123 aa14□□□□□ -0.17
GPC1-205ENST00000427506 TEX50A0A1B0GTY4 177 aa14□□□□□ -0.17
GPC1-205ENST00000427506 IGLC7A0M8Q6 106 aa14□□□□□ -0.17
GPC1-205ENST00000427506 CYB5BO43169 146 aa14□□□□□ -0.17
GPC1-205ENST00000427506 SNAPC5O75971 98 aa14□□□□□ -0.17
GPC1-205ENST00000427506 FGF2P09038 288 aa14□□□□□ -0.17
GPC1-205ENST00000427506 G6PCP35575 357 aa14□□□□□ -0.17
GPC1-205ENST00000427506 THOC7Q6I9Y2 204 aaKnown RBP14□□□□□ -0.17
GPC1-205ENST00000427506 OR10W1Q8NGF6 305 aa14□□□□□ -0.17
GPC1-205ENST00000427506 OR1L8Q8NGR8 309 aa14□□□□□ -0.17
GPC1-205ENST00000427506 CCDC140Q96MF4 163 aa14□□□□□ -0.17
GPC1-205ENST00000427506 ZMAT4Q9H898 229 aa14□□□□□ -0.17
GPC1-205ENST00000427506 DMRT1Q9Y5R6 373 aa14□□□□□ -0.17
GPC1-205ENST00000427506 TRBV7-1A0A0A6YYK4 115 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 IZUMO1RA6ND01 250 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 M0QYG6 137 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 IFNA6P05013 189 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 OR13C7P0DN81 318 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 KLK9Q2XQG4 91 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 ZNF585BQ52M93 769 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 TBC1D26Q86UD7 250 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 SLC38A6Q8IZM9 456 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 OR2K2Q8NGT1 345 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 KLK9Q9UKQ9 250 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 NSG2Q9Y328 171 aa13.99□□□□□ -0.17
GPC1-205ENST00000427506 ZNF320A2RRD8 509 aa13.98□□□□□ -0.17
GPC1-205ENST00000427506 MFSD2BA6NFX1 497 aa13.98□□□□□ -0.17
GPC1-205ENST00000427506 CLEC3BP05452 202 aa13.98□□□□□ -0.17
GPC1-205ENST00000427506 UCP3P55916 312 aa13.98□□□□□ -0.17
GPC1-205ENST00000427506 FAM106AQ4KMX7 169 aa13.98□□□□□ -0.17
GPC1-205ENST00000427506 RNASE10Q5GAN6 216 aaKnown RBP13.98□□□□□ -0.17
GPC1-205ENST00000427506 HSD17B13Q7Z5P4 300 aaPredicted RBP13.98□□□□□ -0.17
GPC1-205ENST00000427506 GPHB5Q86YW7 130 aa13.98□□□□□ -0.17
GPC1-205ENST00000427506 RCHY1Q96PM5 261 aa13.98□□□□□ -0.17
GPC1-205ENST00000427506 ZC4H2Q9NQZ6 224 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms