RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 BUB1B-PAK6H3BSN5 160 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 CHST1O43916 411 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 RAB5CP51148 216 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 RELBQ01201 579 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 EWSR1Q01844 656 aaKnown RBP eCLIP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 BAXQ07812 192 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 DIAPH2-AS1Q14236 149 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 USF2Q15853 346 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 RTL8BQ17RB0 113 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF429Q86V71 674 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 NUDT10Q8NFP7 164 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 OSR1Q8TAX0 266 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 SCARB1Q8WTV0 552 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 FAM168AQ92567 244 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 FAM210BQ96KR6 192 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 NOL4LQ96MY1 436 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 NKX6-2Q9C056 277 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ARV1Q9H2C2 271 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 TMEM140Q9NV12 185 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ONECUT1Q9UBC0 465 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 FBXL17Q9UF56 701 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 AMMECR1Q9Y4X0 333 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 EPG5Q9HCE0 2579 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ZFYVE26Q68DK2 2539 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 J3QKU1 62 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 DLEU1O43261 78 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 HRASP01112 189 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 APOA2P02652 100 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 IGKV1-16P04430 117 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 UBE2KP61086 200 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ERVK-16P61578 105 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF674Q2M3X9 581 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 OR4A47Q6IF82 309 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 UQCC3Q6UW78 93 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 PUSL1Q8N0Z8 303 aaKnown RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 TMEM252Q8N6L7 170 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 OR13D1Q8NGV5 346 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 LINC00052Q96N35 136 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 RBKSQ9H477 322 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 CACFD1Q9UGQ2 172 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 SPTAN1Q13813 2472 aaKnown RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ABCA2Q9BZC7 2435 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 FAM24AA6NFZ4 105 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 C15orf61A6NNL5 157 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 NXPH3O95157 252 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 SPDEFO95238 335 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ATP5J2P56134 94 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 DLX1P56177 255 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 DSCR9P59020 149 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 BLOC1S1P78537 153 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 TGIF2LXQ8IUE1 241 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 RHOVQ96L33 236 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF471Q9BX82 626 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 SLC25A31Q9H0C2 315 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 TMEM14BQ9NUH8 114 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 BET1LQ9NYM9 111 aa4.47□□□□□ -1.69
EPHA4-202ENST00000409854 FOXA2Q9Y261 457 aaPredicted RBP4.47□□□□□ -1.69
EPHA4-202ENST00000409854 FOXH1O75593 365 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 LY86O95711 162 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 TPT1P13693 172 aaKnown RBP4.46□□□□□ -1.7
EPHA4-202ENST00000409854 HOXB4P17483 251 aaPredicted RBP4.46□□□□□ -1.7
EPHA4-202ENST00000409854 DDTP30046 118 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 MC5RP33032 325 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 RPL23AP62750 156 aaKnown RBP4.46□□□□□ -1.7
EPHA4-202ENST00000409854 LDLRAD2Q5SZI1 272 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 SPNS3Q6ZMD2 512 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 SLC16A13Q7RTY0 426 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 VMO1Q7Z5L0 202 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 BAP18Q8IXM2 172 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 PNKDQ8N490 385 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 UBAC2Q8NBM4 344 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 QTRT1Q9BXR0 403 aaKnown RBP4.46□□□□□ -1.7
EPHA4-202ENST00000409854 WFDC1Q9HC57 220 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 WASHC3Q9Y3C0 194 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 IGHV1-3A0A0C4DH29 117 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 IGHV4-61A0A0C4DH41 118 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 A0A1W2PPI3 338 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 SRRM4A7MD48 611 aaKnown RBP4.46□□□□□ -1.7
EPHA4-202ENST00000409854 FAM157AC9JC47 383 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 IFNA17P01571 189 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 IGLV2-23P01705 113 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 ARG1P05089 322 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 REG1BP48304 166 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 LCN2P80188 198 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 RPL7L1Q6DKI1 246 aaKnown RBP4.46□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM14EPQ6UXP3 125 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 VKORC1L1Q8N0U8 176 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 OR4C13Q8NGP0 309 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 OR4A5Q8NH83 315 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 NRGNQ92686 78 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 C1orf159Q96HA4 380 aa4.46□□□□□ -1.7
EPHA4-202ENST00000409854 IGHV4-30-2A0A087WSY4 118 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 TRAV3A0A0B4J244 114 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 RNASEK-C17orf49H0YIS7 233 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 UPK2O00526 184 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 JTBO76095 146 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 COX7A1P24310 79 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 SULT1A1P50225 295 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CAV2P51636 162 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms