RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CLCC1Q96S66 551 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 ZNF747Q9BV97 191 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 COA4Q9NYJ1 87 aa13.09□□□□□ -0.31
TSPAN4-208ENST00000409531 TET2Q6N021 2002 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 A0A0G2JRQ6 117 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 CLPSL1A2RUU4 121 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 C15orf61A6NNL5 157 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 KCNAB3O43448 404 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 ADAP1O75689 374 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 CNIH1O95406 144 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 CA2P00918 260 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 OR9G9P0C7N8 305 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 HLA-GP17693 338 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 SMCO1Q147U7 214 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 TNXAQ16473 311 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 C9orf152Q5JTZ5 239 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 COMMD5Q9GZQ3 224 aa13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 FOXA2Q9Y261 457 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-208ENST00000409531 FCN1O00602 326 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 TSPAN9O75954 239 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 GNB1P62873 340 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 BLCAPP62952 87 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 CX3CL1P78423 397 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 PJVKQ0ZLH3 352 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 ARSJQ5FYB0 599 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 Q6ZNX1 250 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 ZNF429Q86V71 674 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 OR5B3Q8NH48 314 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 MED28Q9H204 178 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 TMEM14BQ9NUH8 114 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 CACNG5Q9UF02 275 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
TSPAN4-208ENST00000409531 IGHV7-81A0A0B4J1V7 117 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 TRAV3A0A0B4J244 114 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 C5orf51A6NDU8 294 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 IGHG2P01859 326 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 FXYD3Q14802 87 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 IZUMO4Q1ZYL8 232 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 MRGPRG-AS1Q2M3A8 158 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 GSG1LQ6UXU4 331 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 Q6ZSV7 163 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 SLC35E3Q7Z769 313 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 OR1L8Q8NGR8 309 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 OR1S1Q8NH92 325 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 LINC01006Q8NI28 216 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 C16orf95Q9H693 158 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 OR51B2Q9Y5P1 312 aa13.06□□□□□ -0.32
TSPAN4-208ENST00000409531 C13orf42A0A1B0GVH6 325 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 RPL27AP46776 148 aaKnown RBP13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 OR2B8PP59922 312 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 IAH1Q2TAA2 248 aaPredicted RBP13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 AARDQ4LEZ3 155 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 Q6ZRM9 215 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 Q8N2B8 174 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 OR5M8Q8NGP6 311 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 OR2T6Q8NHC8 308 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 ARPC1AQ92747 370 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 HSPB9Q9BQS6 159 aa13.05□□□□□ -0.32
TSPAN4-208ENST00000409531 SH2D7A6NKC9 451 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 CCSO14618 274 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 GOSR2O14653 212 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 WIPF1O43516 503 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 IFNA17P01571 189 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 HSPE1P61604 102 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 RRAS2P62070 204 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 MRPL41Q8IXM3 137 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 OR52E5Q8NH55 327 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 ABHD5Q8WTS1 349 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 ZNF702PQ9H963 129 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 MGAT4CQ9UBM8 478 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 RNF114Q9Y508 228 aa13.04□□□□□ -0.32
TSPAN4-208ENST00000409531 TEX50A0A1B0GTY4 177 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 MPTX1A8MV57 137 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 AP4M1O00189 453 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 ST8SIA3O43173 380 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 PITX3O75364 302 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 TRAPPC2P0DI81 140 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 TRAPPC2BP0DI82 140 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 SPCS3P61009 180 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 CYCSP99999 105 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 TMEM267Q0VDI3 215 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 HSD17B13Q7Z5P4 300 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 ZBTB8BQ8NAP8 495 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 SGMS2Q8NHU3 365 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 GRPEL2Q8TAA5 225 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 OR10C1Q96KK4 312 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 C2orf50Q96LR7 162 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 SRSF8Q9BRL6 282 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 PARP11Q9NR21 331 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 ZNF580Q9UK33 172 aa13.03□□□□□ -0.32
TSPAN4-208ENST00000409531 IGF1P05019 195 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms