RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ARFGEF3Q5TH69 2177 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 RRHO14718 337 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 ERHP84090 104 aaKnown RBP13.19□□□□□ -0.3
SNX6-202ENST00000396526 OR5AN1Q8NGI8 311 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 TVP23CQ96ET8 276 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 MIOXQ9UGB7 285 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 WASHC3Q9Y3C0 194 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 ABCA4P78363 2273 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 USF1P22415 310 aaPredicted RBP13.19□□□□□ -0.3
SNX6-202ENST00000396526 PRCDQ00LT1 54 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 CYB561D1Q8N8Q1 229 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 TUBA4BQ9H853 241 aa13.19□□□□□ -0.3
SNX6-202ENST00000396526 IGHV1-8P0DP01 117 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 CDC34P49427 236 aaPredicted RBP13.18□□□□□ -0.3
SNX6-202ENST00000396526 ERVFRD-1P60508 538 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 VMA21Q3ZAQ7 101 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 OR1L8Q8NGR8 309 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 TMEM133Q9H2Q1 129 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 RAI1Q7Z5J4 1906 aaPredicted RBP13.18□□□□□ -0.3
SNX6-202ENST00000396526 COL6A6A6NMZ7 2263 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 H0YJW9 148 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 H3BQ15 152 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 IGKV1-16P04430 117 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 COL8A2P25067 703 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 FLI1Q01543 452 aaPredicted RBP13.18□□□□□ -0.3
SNX6-202ENST00000396526 LY6DQ14210 128 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 TMEM177Q53S58 311 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 SP5Q6BEB4 398 aaPredicted RBP13.18□□□□□ -0.3
SNX6-202ENST00000396526 MRPL41Q8IXM3 137 aaKnown RBP13.18□□□□□ -0.3
SNX6-202ENST00000396526 OR4A5Q8NH83 315 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 NEU4Q8WWR8 484 aaPredicted RBP13.18□□□□□ -0.3
SNX6-202ENST00000396526 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 AVPI1Q5T686 147 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 TMEM204Q9BSN7 226 aa13.18□□□□□ -0.3
SNX6-202ENST00000396526 A0A087X0M5 115 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 A0A1B0GX30 115 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 SAA1P0DJI8 122 aaPredicted RBP13.17□□□□□ -0.3
SNX6-202ENST00000396526 OPRK1P41145 380 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 REG1BP48304 166 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 RPL8P62917 257 aaKnown RBP13.17□□□□□ -0.3
SNX6-202ENST00000396526 TEPPQ6URK8 271 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 ZNF596Q8TC21 504 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 RAB24Q969Q5 203 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 PRORYQ9H606 182 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 A0A1W2PN81 502 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 CA2P00918 260 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 CHRNA7P36544 502 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 PNRC1Q12796 327 aaPredicted RBP13.17□□□□□ -0.3
SNX6-202ENST00000396526 SLC35E3Q7Z769 313 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 NABP2Q9BQ15 211 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 ZNRD1Q9P1U0 126 aa13.17□□□□□ -0.3
SNX6-202ENST00000396526 FNDC10F2Z333 226 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 LYNX1G3V0Z9 82 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 LYNX1P0DP58 116 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 PAX6P26367 422 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 AKR1C3P42330 323 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 LGALS7P47929 136 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNX6-202ENST00000396526 TREML4Q6UXN2 200 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 AMMECR1Q9Y4X0 333 aaPredicted RBP13.16□□□□□ -0.3
SNX6-202ENST00000396526 PPIAL4CA0A0B4J2A2 164 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 MT-ND4LP03901 98 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 PPIAL4GP0DN37 164 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 NANPQ8TBE9 248 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 PRELID1Q9Y255 219 aa13.16□□□□□ -0.3
SNX6-202ENST00000396526 B4DEV8 164 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 ACTL6BO94805 426 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 MDKP21741 143 aaPredicted RBP13.15□□□□□ -0.3
SNX6-202ENST00000396526 DLL1O00548 723 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 ENSAO43768 121 aaKnown RBP13.15□□□□□ -0.3
SNX6-202ENST00000396526 IGHV2-70P01814 119 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 RBP4P02753 201 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 ZNF137PP52743 207 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 MEF2BQ02080 365 aaPredicted RBP13.15□□□□□ -0.3
SNX6-202ENST00000396526 TEX50A0A1B0GTY4 177 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 SIAH2O43255 324 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 MT-CO2P00403 227 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 IGKV1D-33P01593 117 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 IGKV1-33P01594 117 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 OPN1MWP04001 364 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
SNX6-202ENST00000396526 OPN1MW2P0DN77 364 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 OPN1MW3P0DN78 364 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 DLX6P56179 175 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 CLEC7AQ9BXN2 247 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 PXMP4Q9Y6I8 212 aa13.15□□□□□ -0.3
SNX6-202ENST00000396526 SRRM4A7MD48 611 aaKnown RBP13.14□□□□□ -0.31
SNX6-202ENST00000396526 HMGB3O15347 200 aaKnown RBP13.14□□□□□ -0.31
SNX6-202ENST00000396526 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
SNX6-202ENST00000396526 ZNF727A8MUV8 499 aa13.14□□□□□ -0.31
SNX6-202ENST00000396526 FBP1P09467 338 aa13.14□□□□□ -0.31
SNX6-202ENST00000396526 RAB5BP61020 215 aa13.14□□□□□ -0.31
SNX6-202ENST00000396526 FCN3O75636 299 aa13.14□□□□□ -0.31
SNX6-202ENST00000396526 OR2C1O95371 312 aa13.14□□□□□ -0.31
SNX6-202ENST00000396526 LIPFP07098 398 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms