RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 LYNX1G3V0Z9 82 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 POLQO75417 2590 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 LYNX1P0DP58 116 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 PAX1P15863 534 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 ZNF146Q15072 292 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 DNLZQ5SXM8 178 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 COL5A1-AS1Q5SY13 56 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 H1FOOQ8IZA3 346 aaPredicted RBP9□□□□□ -0.97
NEDD9-201ENST00000379433 OR10X1Q8NGY0 326 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 PITPNC1Q9UKF7 332 aa9□□□□□ -0.97
NEDD9-201ENST00000379433 IGLV1-44P01699 117 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 LPAR6P43657 344 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 DLX1P56177 255 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 TNXAQ16473 311 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 CCDC144NLQ6NUI1 221 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 Q6ZRG5 221 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 GPR146Q96CH1 333 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 TMED3Q9Y3Q3 217 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.99□□□□□ -0.973e-14■■□□□ 12.9
NEDD9-201ENST00000379433 LOC105371242A0A075B767 164 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 K7ENP7 123 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 TMEM50AO95807 157 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 EDN2P20800 178 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 RPL30P62888 115 aaKnown RBP8.99□□□□□ -0.97
NEDD9-201ENST00000379433 FAM213BQ8TBF2 198 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 RNF141Q8WVD5 230 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 H1FXQ92522 213 aaKnown RBP8.99□□□□□ -0.97
NEDD9-201ENST00000379433 ABHD14AQ9BUJ0 271 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 SFXN3Q9BWM7 321 aa8.99□□□□□ -0.97
NEDD9-201ENST00000379433 DPRXA6NFQ7 191 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 SMAGPQ0VAQ4 97 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 RPL39P5Q59GN2 51 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 AQP10Q96PS8 301 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 CHRDL1Q9BU40 450 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 IGSF23A1L1A6 192 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 LY6HO94772 140 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 HOXA5P20719 270 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 VDAC1P21796 283 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 EWSR1Q01844 656 aaKnown RBP eCLIP8.98□□□□□ -0.97
NEDD9-201ENST00000379433 SRSF4Q08170 494 aaKnown RBP8.98□□□□□ -0.97
NEDD9-201ENST00000379433 NRGNQ92686 78 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 RND1Q92730 232 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 DYNLRB1Q9NP97 96 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
NEDD9-201ENST00000379433 DYSFO75923 2080 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 C17orf98A8MV24 154 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 C1QTNF9BB2RNN3 333 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
NEDD9-201ENST00000379433 CDS2O95674 445 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 CLDN1O95832 211 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 C1QTNF9P0C862 333 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 GLRXP35754 106 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 IL15RAQ13261 267 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 KIAA0141Q14154 515 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-201ENST00000379433 GCSAMLQ5JQS6 135 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 ASB13Q8WXK3 278 aa8.98□□□□□ -0.97
NEDD9-201ENST00000379433 EIF5A2Q9GZV4 153 aaKnown RBP8.98□□□□□ -0.97
NEDD9-201ENST00000379433 SMCO3A2RU48 225 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-201ENST00000379433 CCL21O00585 134 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 SPINT2O43291 252 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 FCGR3BO75015 233 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 ACTL6BO94805 426 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 PLAUP00749 431 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 BRS3P32247 399 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 DYNLT3P51808 116 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 UCP3P55916 312 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 PLEKHF2Q9H8W4 249 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 LRRK2Q5S007 2527 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 S1PR2O95136 353 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 CLDN14O95500 239 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 IGKV1-39P01597 117 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 IGHV1-46P01743 117 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 IGKV1D-39P04432 117 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 KITLGP21583 273 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 ELLP55199 621 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-201ENST00000379433 FAM90A1Q86YD7 464 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 LYPD6BQ8NI32 183 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 C20orf24Q9BUV8 137 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 GCM1Q9NP62 436 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 CFAP46Q8IYW2 2715 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 CELSR1Q9NYQ6 3014 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 M0R1X1 148 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 IGLV2-14P01704 120 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 PMCHP20382 165 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 RANP62826 216 aaKnown RBP8.97□□□□□ -0.97
NEDD9-201ENST00000379433 SSBP2P81877 361 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-201ENST00000379433 LINC00596Q86U02 117 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 MCRIP2Q9BUT9 160 aaKnown RBP8.97□□□□□ -0.97
NEDD9-201ENST00000379433 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 CLN8Q9UBY8 286 aa8.97□□□□□ -0.97
NEDD9-201ENST00000379433 BORCS7-ASMTA0A0B4J1R7 106 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 ODAMA1E959 279 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 OOEPA6NGQ2 149 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 REG1BP48304 166 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 WDR25Q64LD2 544 aaPredicted RBP8.96□□□□□ -0.97
NEDD9-201ENST00000379433 MUC15Q8N387 334 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 OR4P4Q8NGL7 312 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 SPIN2AQ99865 258 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms