RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 IGHV1-8P0DP01 117 aa8□□□□□ -1.13
TPM3-210ENST00000368530 TPT1P13693 172 aaKnown RBP8□□□□□ -1.13
TPM3-210ENST00000368530 IER3P46695 156 aa8□□□□□ -1.13
TPM3-210ENST00000368530 REG1BP48304 166 aa8□□□□□ -1.13
TPM3-210ENST00000368530 EWSR1Q01844 656 aaKnown RBP eCLIP8□□□□□ -1.13
TPM3-210ENST00000368530 SPINK9Q5DT21 86 aa8□□□□□ -1.13
TPM3-210ENST00000368530 CLLU1Q5K131 121 aa8□□□□□ -1.13
TPM3-210ENST00000368530 CD300LFQ8TDQ1 290 aa8□□□□□ -1.13
TPM3-210ENST00000368530 SSMEM1Q8WWF3 244 aa8□□□□□ -1.13
TPM3-210ENST00000368530 DDB2Q92466 427 aa8□□□□□ -1.13
TPM3-210ENST00000368530 MRPL20Q9BYC9 149 aaKnown RBP8□□□□□ -1.13
TPM3-210ENST00000368530 WFDC1Q9HC57 220 aa8□□□□□ -1.13
TPM3-210ENST00000368530 GAB2Q9UQC2 676 aa8□□□□□ -1.13
TPM3-210ENST00000368530 SESN1Q9Y6P5 492 aa8□□□□□ -1.13
TPM3-210ENST00000368530 IGHV1-69DA0A0B4J2H0 117 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 A0A0U1RQK1 487 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 TEX46H3BTG2 121 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 J3QR06 171 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 TAAR5O14804 337 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 SYNGR2O43760 224 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 CST7O76096 145 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 TSPAN15O95858 294 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 IGHV1-69P01742 117 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 OR9G9P0C7N8 305 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 P0C879 139 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 CT45A6P0DMU7 189 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 CT45A5P0DMU8 189 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 CT45A7P0DMV0 189 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 COX7A1P24310 79 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 KIR2DS2P43631 304 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 PAX9P55771 341 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 OR2B8PP59922 312 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 ERVK-16P61578 105 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 TMEM267Q0VDI3 215 aaPredicted RBP7.99□□□□□ -1.13
TPM3-210ENST00000368530 CLINT1Q14677 625 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 Q6ZSV7 163 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 ZNF833PQ6ZTB9 187 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 BAP18Q8IXM2 172 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 ABHD12Q8N2K0 398 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 C11orf42Q8N5U0 333 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 TMEM252Q8N6L7 170 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 OR4S2Q8NH73 311 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 STOML3Q8TAV4 291 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 TMED6Q8WW62 240 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 ADTRPQ96IZ2 230 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 CXorf58Q96LI9 332 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 TMEM133Q9H2Q1 129 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 RBKSQ9H477 322 aa7.99□□□□□ -1.13
TPM3-210ENST00000368530 FAM212BQ9NTI7 297 aaPredicted RBP7.99□□□□□ -1.13
TPM3-210ENST00000368530 LYRM2Q9NU23 88 aaPredicted RBP7.99□□□□□ -1.13
TPM3-210ENST00000368530 A0A1W2PPH5 198 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 TOR1AO14656 332 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 RBFOX2O43251 390 aaKnown RBP eCLIP7.98□□□□□ -1.13
TPM3-210ENST00000368530 RPL23AP62750 156 aaKnown RBP7.98□□□□□ -1.13
TPM3-210ENST00000368530 TAGLNQ01995 201 aaKnown RBP7.98□□□□□ -1.13
TPM3-210ENST00000368530 DIAPH2-AS1Q14236 149 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 COMMD7Q86VX2 200 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 C1QL4Q86Z23 238 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 TMEM217Q8N7C4 229 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 OR9G1Q8NH87 305 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 CITED4Q96RK1 184 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 RAB40CQ96S21 281 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 QTRT1Q9BXR0 403 aaKnown RBP7.98□□□□□ -1.13
TPM3-210ENST00000368530 SLC25A31Q9H0C2 315 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 C16orf95Q9H693 158 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.98□□□□□ -1.13
TPM3-210ENST00000368530 SLC35D1Q9NTN3 355 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 COA4Q9NYJ1 87 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 PSENENQ9NZ42 101 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 TRAV3A0A0B4J244 114 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 H7C2Y5 167 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 NMBP08949 121 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 NQO2P16083 231 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 DYNLT3P51808 116 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 UBE2KP61086 200 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 ARF6P62330 175 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 TNFRSF9Q07011 255 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 RTL8BQ17RB0 113 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 OR4A16Q8NH70 328 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 C8orf46Q8TAG6 207 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 LHX4Q969G2 390 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 PHYHIPLQ96FC7 376 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 TMEM140Q9NV12 185 aa7.98□□□□□ -1.13
TPM3-210ENST00000368530 A0A087X0M5 115 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 IGHV2-26A0A0B4J1V2 119 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 A0A1B0GX30 115 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 LINC00862A6NCI5 91 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 CEBPZOSA8MTT3 80 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 TXNL1O43396 289 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 FBXO24O75426 580 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 MED6O75586 246 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 TSPAN9O75954 239 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 IFNA17P01571 189 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 APOA2P02652 100 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 GAPDHP04406 335 aaKnown RBP7.97□□□□□ -1.13
TPM3-210ENST00000368530 METTL15P1P0C7V9 234 aa7.97□□□□□ -1.13
TPM3-210ENST00000368530 RPS16P62249 146 aaKnown RBP7.97□□□□□ -1.13
TPM3-210ENST00000368530 EIF5AP63241 154 aaKnown RBP7.97□□□□□ -1.13
TPM3-210ENST00000368530 ARSJQ5FYB0 599 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms