RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 MARVELD3Q96A59 401 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 FOXA2Q9Y261 457 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-203ENST00000361654 FBLL1A6NHQ2 334 aaKnown RBP9.28□□□□□ -0.92
CLIP1-203ENST00000361654 CA2P00918 260 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 IGHV3-23P01764 117 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 ZNF345Q14585 488 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 STPG2Q8N412 459 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 DRAM1Q8N682 238 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 KCNE5Q9UJ90 142 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 FAM186AA6NE01 2351 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 SCN4AP35499 1836 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 A0A1W2PP11 408 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 MRPL14Q6P1L8 145 aaKnown RBP9.28□□□□□ -0.92
CLIP1-203ENST00000361654 TMEM91Q6ZNR0 172 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 CD59P13987 128 aa9.27□□□□□ -0.92
CLIP1-203ENST00000361654 CD33P20138 364 aa9.27□□□□□ -0.92
CLIP1-203ENST00000361654 GZMMP51124 257 aa9.27□□□□□ -0.92
CLIP1-203ENST00000361654 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.92
CLIP1-203ENST00000361654 SMIM8Q96KF7 97 aa9.27□□□□□ -0.92
CLIP1-203ENST00000361654 GPR132Q9UNW8 380 aa9.27□□□□□ -0.92
CLIP1-203ENST00000361654 TRIP11Q15643 1979 aa9.27□□□□□ -0.92
CLIP1-203ENST00000361654 PCM1Q15154 2024 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 SRD5A1P18405 259 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 LINC00305Q7Z4B0 112 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 IFI27L2Q9H2X8 130 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 PPP1R3EQ9H7J1 279 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 SOX21Q9Y651 276 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-203ENST00000361654 FOCADQ5VW36 1801 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 MARF1Q9Y4F3 1742 aaKnown RBP9.27□□□□□ -0.93
CLIP1-203ENST00000361654 COL4A1P02462 1669 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 SIGLEC5O15389 551 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 CRYBA2P53672 197 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 RUNX1Q01196 453 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 ICAM4Q14773 271 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 OR11H4Q8NGC9 324 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 CBY1Q9Y3M2 126 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 LOC107984156A0A0G2JMH3 177 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 SLC25A16P16260 332 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 UCP3P55916 312 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 ARL17AQ8IVW1 177 aa9.27□□□□□ -0.93
CLIP1-203ENST00000361654 IGHV3-66A0A0C4DH42 116 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 IQCF6A8MYZ5 107 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 SAP30O75446 220 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 RPS11P62280 158 aaKnown RBP eCLIP9.26□□□□□ -0.93
CLIP1-203ENST00000361654 TEX45Q8NA69 505 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 M0R381 172 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 AMELYQ99218 206 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 TRAV24A0A0B4J272 114 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 TRAV40A0A0B4J280 105 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 C1QCP02747 245 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 SMIM6P0DI80 62 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 RPL39P5Q59GN2 51 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 LMX1BO60663 402 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 CD5P06127 495 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 GCSAMLQ5JQS6 135 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 VKORC1L1Q8N0U8 176 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 HIST1H4GQ99525 98 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 NEUROG3Q9Y4Z2 214 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 H3BTX0 84 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 TIMP3P35625 211 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 NPBWR2P48146 333 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 NUDT11Q96G61 164 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 SLC50A1Q9BRV3 221 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
CLIP1-203ENST00000361654 RTTNQ86VV8 2226 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 DIRC3C9JPN6 131 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 ZIC3O60481 467 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 CNTFRP26992 372 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 PSG7Q13046 419 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 UBE2V2Q15819 145 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 RBMY1BA6NDE4 496 aaKnown RBP9.25□□□□□ -0.93
CLIP1-203ENST00000361654 RBMY1EA6NEQ0 496 aaKnown RBP9.25□□□□□ -0.93
CLIP1-203ENST00000361654 C12orf77C9JDV5 145 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 J3QKU1 62 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 RBMY1DP0C7P1 496 aaKnown RBP9.25□□□□□ -0.93
CLIP1-203ENST00000361654 ZNF688P0C7X2 276 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
CLIP1-203ENST00000361654 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 TCTAP57738 103 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 C11orf44Q8N8P7 122 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 RNASEH2CQ8TDP1 164 aaKnown RBP9.25□□□□□ -0.93
CLIP1-203ENST00000361654 TMEM133Q9H2Q1 129 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 MSRB2Q9Y3D2 182 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 SIRT4Q9Y6E7 314 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-203ENST00000361654 KLF4O43474 513 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 CTSBP07858 339 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 ZFP36L1Q07352 338 aaKnown RBP9.25□□□□□ -0.93
CLIP1-203ENST00000361654 SLX1AQ9BQ83 275 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 GGACTQ9BVM4 153 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 ARID1AO14497 2285 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 SLC25A20O43772 301 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 NMBP08949 121 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 CXCL2P19875 107 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms