RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GOSR2O14653 212 aa20.04■□□□□ 0.8
SSBP3-202ENST00000357475 SNAPC5O75971 98 aa20.04■□□□□ 0.8
SSBP3-202ENST00000357475 EGR2P11161 476 aaPredicted RBP20.04■□□□□ 0.8
SSBP3-202ENST00000357475 FXYD3Q14802 87 aa20.04■□□□□ 0.8
SSBP3-202ENST00000357475 ZNF562Q6V9R5 426 aa20.04■□□□□ 0.8
SSBP3-202ENST00000357475 TMEM14BQ9NUH8 114 aa20.04■□□□□ 0.8
SSBP3-202ENST00000357475 LINC00527Q9UJ94 153 aa20.04■□□□□ 0.8
SSBP3-202ENST00000357475 A0A1B0GVG6 124 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 FAM25EA8MYX2 175 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 ST8SIA3O43173 380 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 APELAP0DMC3 54 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 COMPP49747 757 aaPredicted RBP20.03■□□□□ 0.8
SSBP3-202ENST00000357475 SPINK9Q5DT21 86 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 GRPEL2Q8TAA5 225 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 WDR89Q96FK6 387 aaPredicted RBP20.03■□□□□ 0.8
SSBP3-202ENST00000357475 PRSS22Q9GZN4 317 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 OR51B2Q9Y5P1 312 aa20.03■□□□□ 0.8
SSBP3-202ENST00000357475 TEX50A0A1B0GTY4 177 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 C13orf42A0A1B0GVH6 325 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 ATP6V0E1O15342 81 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 RBMXL2O75526 392 aaKnown RBP20.02■□□□□ 0.8
SSBP3-202ENST00000357475 CNIH1O95406 144 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 IFNA21P01568 189 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 IGHG2P01859 326 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 SULT1A3P0DMM9 295 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 SULT1A4P0DMN0 295 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 SMCO1Q147U7 214 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 FCN2Q15485 313 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 PARP11Q9NR21 331 aa20.02■□□□□ 0.8
SSBP3-202ENST00000357475 FOXA2Q9Y261 457 aaPredicted RBP20.02■□□□□ 0.8
SSBP3-202ENST00000357475 PITX3O75364 302 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 CRYBA1P05813 215 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 CXCL3P19876 107 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 C11orf87Q6NUJ2 197 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 SLC35E3Q7Z769 313 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 FOXRED2Q8IWF2 684 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 Q8N2B8 174 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 OR11H7Q8NGC8 314 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 SRSF12Q8WXF0 261 aaKnown RBP20.02■□□□□ 0.79
SSBP3-202ENST00000357475 ARPC1AQ92747 370 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 NOL4LQ96MY1 436 aaPredicted RBP20.02■□□□□ 0.79
SSBP3-202ENST00000357475 PRNDQ9UKY0 176 aa20.02■□□□□ 0.79
SSBP3-202ENST00000357475 A0A1B0GU03 582 aa20.01■□□□□ 0.79
SSBP3-202ENST00000357475 ACTL6BO94805 426 aa20.01■□□□□ 0.79
SSBP3-202ENST00000357475 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-202ENST00000357475 MGAT4CQ9UBM8 478 aa20.01■□□□□ 0.79
SSBP3-202ENST00000357475 hCG_2014768A0A024R1R8 64 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 C5orf51A6NDU8 294 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 HMX3A6NHT5 357 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 TSPAN9O75954 239 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 RPL27AP46776 148 aaKnown RBP20■□□□□ 0.79
SSBP3-202ENST00000357475 H2BFSP57053 126 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 RPL15P61313 204 aaKnown RBP20■□□□□ 0.79
SSBP3-202ENST00000357475 IAH1Q2TAA2 248 aaPredicted RBP20■□□□□ 0.79
SSBP3-202ENST00000357475 CXorf66Q5JRM2 361 aaPredicted RBP20■□□□□ 0.79
SSBP3-202ENST00000357475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20■□□□□ 0.79
SSBP3-202ENST00000357475 OR10W1Q8NGF6 305 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 OR5M8Q8NGP6 311 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 ABHD5Q8WTS1 349 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 FYTTD1Q96QD9 318 aaKnown RBP20■□□□□ 0.79
SSBP3-202ENST00000357475 COMMD5Q9GZQ3 224 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 MED28Q9H204 178 aa20■□□□□ 0.79
SSBP3-202ENST00000357475 PIGBOS1A0A0B4J2F0 54 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 MSGN1A6NI15 193 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 TEX22C9J3V5 150 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 MAS1LP35410 378 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 AARDQ4LEZ3 155 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 ZNF429Q86V71 674 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 OR1S1Q8NH92 325 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 HINT2Q9BX68 163 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 COA4Q9NYJ1 87 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 WSB1Q9Y6I7 421 aa19.99■□□□□ 0.79
SSBP3-202ENST00000357475 G3V318 75 aa19.98■□□□□ 0.79
SSBP3-202ENST00000357475 SLC25A6P12236 298 aa19.98■□□□□ 0.79
SSBP3-202ENST00000357475 RRAS2P62070 204 aaPredicted RBP19.98■□□□□ 0.79
SSBP3-202ENST00000357475 ASPHD1Q5U4P2 390 aa19.98■□□□□ 0.79
SSBP3-202ENST00000357475 THOC7Q6I9Y2 204 aaKnown RBP19.98■□□□□ 0.79
SSBP3-202ENST00000357475 ZBTB8BQ8NAP8 495 aaPredicted RBP19.98■□□□□ 0.79
SSBP3-202ENST00000357475 NDUFA4L2Q9NRX3 87 aa19.98■□□□□ 0.79
SSBP3-202ENST00000357475 SERTAD4Q9NUC0 356 aa19.98■□□□□ 0.79
SSBP3-202ENST00000357475 GSKIPQ9P0R6 139 aa19.98■□□□□ 0.79
SSBP3-202ENST00000357475 FGF2P09038 288 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 LFNGQ8NES3 379 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 OR4D5Q8NGN0 318 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 IFNA17P01571 189 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 HSPE1P61604 102 aaKnown RBP19.97■□□□□ 0.79
SSBP3-202ENST00000357475 ARSJQ5FYB0 599 aaPredicted RBP19.97■□□□□ 0.79
SSBP3-202ENST00000357475 GSG1LQ6UXU4 331 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 OR1L8Q8NGR8 309 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 SPIN2AQ99865 258 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 SPIN2BQ9BPZ2 258 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 FKBP11Q9NYL4 201 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 ZNF257Q9Y2Q1 563 aa19.97■□□□□ 0.79
SSBP3-202ENST00000357475 KCNAB3O43448 404 aa19.96■□□□□ 0.79
SSBP3-202ENST00000357475 AREGP15514 252 aa19.96■□□□□ 0.79
SSBP3-202ENST00000357475 ECSCRQ19T08 205 aa19.96■□□□□ 0.79
SSBP3-202ENST00000357475 C19orf35Q6ZS72 473 aa19.96■□□□□ 0.79
SSBP3-202ENST00000357475 OR5B3Q8NH48 314 aa19.96■□□□□ 0.79
SSBP3-202ENST00000357475 SGMS2Q8NHU3 365 aa19.96■□□□□ 0.79
SSBP3-202ENST00000357475 C2orf50Q96LR7 162 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms