RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ERASQ7Z444 233 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 HIF1ANQ9NWT6 349 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 PRB3Q04118 309 aaPredicted RBP10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 TNXAQ16473 311 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 BHLHA15Q7RTS1 189 aaPredicted RBP10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 ZNF106Q9H2Y7 1883 aaKnown RBP10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 MGST3O14880 152 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 SMPD2O60906 423 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 APCSP02743 223 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 IGFBP2P18065 325 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 PLA2G5P39877 138 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 CLDN18P56856 261 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 CD81P60033 236 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 C14orf144Q96I85 54 aa10.44□□□□□ -0.74
SNRNP48-201ENST00000342415 OR4A8P0C604 315 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 LINC00869P0C866 280 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 CEACAM1P13688 526 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 ZNF596Q8TC21 504 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 LNP1A1A4G5 178 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 GCHFRP30047 84 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 TFPI2P48307 235 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 CENPWQ5EE01 88 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 ARSJQ5FYB0 599 aaPredicted RBP10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 RNASE7Q9H1E1 156 aaKnown RBP10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 CALYQ9NYX4 217 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 hADV38S2A0JD32 116 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 TMEM210A6NLX4 147 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 SERF1AO75920 110 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 COX5BP10606 129 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 SELLP14151 372 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 HTR1DP28221 377 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 JOSD1Q15040 202 aaPredicted RBP10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 SPATA45Q537H7 98 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 TMEM42Q69YG0 159 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 LHFPL4Q7Z7J7 247 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 NOTCH2Q04721 2471 aa10.43□□□□□ -0.74
SNRNP48-201ENST00000342415 TNCP24821 2201 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 ACACBO00763 2458 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 C21orf140B9A014 251 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 NDUFB3O43676 98 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 CA2P00918 260 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 FCER1GP30273 86 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 FOXC1Q12948 553 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 KRTCAP3Q53RY4 240 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 WDR73Q6P4I2 378 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 PDPNQ86YL7 162 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 OCC1Q8TAD7 63 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 NABP2Q9BQ15 211 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 CBY1Q9Y3M2 126 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 A6NNC1 897 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 IGHV2-5P01817 119 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 PAX9P55771 341 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 TAS2R60P59551 318 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 SCGB2A2Q13296 93 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 ZCCHC24Q8N2G6 241 aaKnown RBP10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 OBSL1O75147 1896 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 SIAH2O43255 324 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 IL6RP08887 468 aaPredicted RBP10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 AARDQ4LEZ3 155 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 ANAPC10Q9UM13 185 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 PTPRQQ9UMZ3 2332 aa10.42□□□□□ -0.74
SNRNP48-201ENST00000342415 MKRN2OSH3BPM6 223 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 BMPR1BO00238 502 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 RNF2Q99496 336 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 RNF7Q9UBF6 113 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 IGHV2-70P01814 119 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 CECR9P0C854 216 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 COL8A1P27658 744 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 ADMP35318 185 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 HSPE1P61604 102 aaKnown RBP10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 GABRA6Q16445 453 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 VMA21Q3ZAQ7 101 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 MIR17HGQ75NE6 70 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 PRSS3P2Q8NHM4 247 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 MBD3L1Q8WWY6 194 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 ST6GALNAC6Q969X2 333 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 PROK2Q9HC23 129 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 BET1LQ9NYM9 111 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 TIMM9Q9Y5J7 89 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 TRBV24-1A0A075B6N3 115 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 OR9G9P0C7N8 305 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 TNFRSF1AP19438 455 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 PEAR1Q5VY43 1037 aaPredicted RBP10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 ACP7Q6ZNF0 438 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 ZNF497Q6ZNH5 498 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 BCL2L2Q92843 193 aaPredicted RBP10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 NDUFAF3Q9BU61 184 aa10.41□□□□□ -0.74
SNRNP48-201ENST00000342415 IGHV1-2P23083 117 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 PCSK4Q6UW60 755 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 NGBQ9NPG2 151 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 PRNDQ9UKY0 176 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 TRIOO75962 3097 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 ZNF503-AS2A6NEH8 195 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms