RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 GNB1P62873 340 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 SRPXP78539 464 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 PJVKQ0ZLH3 352 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 FXYD3Q14802 87 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 ENKURQ8TC29 256 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 ABHD5Q8WTS1 349 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 ARPC1AQ92747 370 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 SEC22AQ96IW7 307 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 PARP11Q9NR21 331 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 NBEAL2Q6ZNJ1 2754 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 COL7A1Q02388 2944 aa11.69□□□□□ -0.54
MUC1-202ENST00000338684 UPK2O00526 184 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 ATP6V0E1O15342 81 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 IGKV1-39P01597 117 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 IGKV1D-39P04432 117 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 IL6RP08887 468 aaPredicted RBP11.68□□□□□ -0.54
MUC1-202ENST00000338684 VAMP1P23763 118 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 HOXD3P31249 432 aaPredicted RBP11.68□□□□□ -0.54
MUC1-202ENST00000338684 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
MUC1-202ENST00000338684 SUPT4H1P63272 117 aaKnown RBP11.68□□□□□ -0.54
MUC1-202ENST00000338684 SLC35B1P78383 322 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 TMEM267Q0VDI3 215 aaPredicted RBP11.68□□□□□ -0.54
MUC1-202ENST00000338684 TMEM187Q14656 261 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 TNXAQ16473 311 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 C11orf87Q6NUJ2 197 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 ETV3LQ6ZN32 361 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 C18orf65Q6ZTR6 163 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 H2BFWTQ7Z2G1 175 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 ZNF329Q86UD4 541 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 ZNF695Q8IW36 515 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 STPG2Q8N412 459 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 OR4X2Q8NGF9 303 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 IL22RA2Q969J5 263 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 TMEM56Q96MV1 263 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 C20orf85Q9H1P6 137 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 PALMDQ9NP74 551 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 FLVCR2Q9UPI3 526 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 TMEM56-RWDD3S4R434 201 aa11.68□□□□□ -0.54
MUC1-202ENST00000338684 PSMB11A5LHX3 300 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 SNAPC5O75971 98 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 SFT2D2O95562 160 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 HLA-GP17693 338 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 VDAC1P21796 283 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 AKR1C2P52895 323 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 CRIP2P52943 208 aaPredicted RBP11.67□□□□□ -0.54
MUC1-202ENST00000338684 PPP1R1AQ13522 171 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 DEFB121Q5J5C9 76 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 KHDC1LQ5JSQ8 128 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 LINC00482Q8N8I6 264 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 RBPMSQ93062 196 aaKnown RBP11.67□□□□□ -0.54
MUC1-202ENST00000338684 RRNAD1Q96FB5 475 aaKnown RBP11.67□□□□□ -0.54
MUC1-202ENST00000338684 RCC1LQ96I51 464 aaKnown RBP11.67□□□□□ -0.54
MUC1-202ENST00000338684 NOL4LQ96MY1 436 aaPredicted RBP11.67□□□□□ -0.54
MUC1-202ENST00000338684 ALX4Q9H161 411 aaPredicted RBP11.67□□□□□ -0.54
MUC1-202ENST00000338684 NUDT15Q9NV35 164 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 NUBP2Q9Y5Y2 271 aa11.67□□□□□ -0.54
MUC1-202ENST00000338684 TRAV6A0A075B6T7 132 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 TRAV41A0A0B4J266 112 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 OR4E1P0C645 316 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 RAB25P57735 213 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 SSBP2P81877 361 aaPredicted RBP11.66□□□□□ -0.54
MUC1-202ENST00000338684 NDPQ00604 133 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 EGFEM1PQ0D2K5 195 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 AKIRIN2Q53H80 203 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 TMEM268Q5VZI3 342 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 FAM219AQ8IW50 185 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 MRPL41Q8IXM3 137 aaKnown RBP11.66□□□□□ -0.54
MUC1-202ENST00000338684 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
MUC1-202ENST00000338684 LGI3Q8N145 548 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 DUSP18Q8NEJ0 188 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 RNASE11Q8TAA1 199 aaKnown RBP11.66□□□□□ -0.54
MUC1-202ENST00000338684 GRPEL2Q8TAA5 225 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 SRSF12Q8WXF0 261 aaKnown RBP11.66□□□□□ -0.54
MUC1-202ENST00000338684 TMEM68Q96MH6 324 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 COMMD5Q9GZQ3 224 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 FKBP11Q9NYL4 201 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 LINC00527Q9UJ94 153 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
MUC1-202ENST00000338684 TRAV3A0A0B4J244 114 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 IGKV1-5P01602 117 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 HLA-AP01891 365 aaKnown RBP11.65□□□□□ -0.54
MUC1-202ENST00000338684 H2AFB2P0C5Z0 115 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 EGR2P11161 476 aaPredicted RBP11.65□□□□□ -0.54
MUC1-202ENST00000338684 ANXA7P20073 488 aaKnown RBP11.65□□□□□ -0.54
MUC1-202ENST00000338684 RPL27AP46776 148 aaKnown RBP11.65□□□□□ -0.54
MUC1-202ENST00000338684 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 C4orf46Q504U0 113 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 NRARPQ7Z6K4 114 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 COMMD1Q8N668 190 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 OR4A16Q8NH70 328 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 LHFPL5Q8TAF8 219 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 PHB2Q99623 299 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 SPIN2AQ99865 258 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 SPIN2BQ9BPZ2 258 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 FBXO7Q9Y3I1 522 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 WSB1Q9Y6I7 421 aa11.65□□□□□ -0.54
MUC1-202ENST00000338684 DNAH9Q9NYC9 4486 aa11.64□□□□□ -0.55
MUC1-202ENST00000338684 A0A0B4J2A0 478 aa11.64□□□□□ -0.55
MUC1-202ENST00000338684 DUXBA0A1W2PPF3 345 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms