RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RPEQ96AT9 228 aa18.77■□□□□ 0.6
TSEN54-201ENST00000333213 SPIN2AQ99865 258 aa18.77■□□□□ 0.6
TSEN54-201ENST00000333213 SPIN2BQ9BPZ2 258 aa18.77■□□□□ 0.6
TSEN54-201ENST00000333213 GINS3Q9BRX5 216 aa18.77■□□□□ 0.6
TSEN54-201ENST00000333213 DPM3Q9P2X0 92 aa18.77■□□□□ 0.6
TSEN54-201ENST00000333213 CR1P17927 2039 aa18.77■□□□□ 0.59
TSEN54-201ENST00000333213 A0A1W2PPI3 338 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 P2RY1P47900 373 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 PEA15Q15121 130 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 DYNAPQ8N1N2 210 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 HIF1ANQ9NWT6 349 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 PLA2G2EQ9NZK7 142 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 NQO2P16083 231 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 UBE2E1P51965 193 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 ID3Q02535 119 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 RTL8BQ17RB0 113 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 WFDC11Q8NEX6 87 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 AJUBAQ96IF1 538 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 RITA1Q96K30 269 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 STRAPQ9Y3F4 350 aaKnown RBP18.76■□□□□ 0.59
TSEN54-201ENST00000333213 LSM5Q9Y4Y9 91 aaKnown RBP18.76■□□□□ 0.59
TSEN54-201ENST00000333213 HILPDAQ9Y5L2 63 aa18.76■□□□□ 0.59
TSEN54-201ENST00000333213 CENPVL3A0A0U1RRI6 287 aa18.75■□□□□ 0.59
TSEN54-201ENST00000333213 OR9G9P0C7N8 305 aa18.75■□□□□ 0.59
TSEN54-201ENST00000333213 RHOVQ96L33 236 aa18.75■□□□□ 0.59
TSEN54-201ENST00000333213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■■■■□ 20.5
TSEN54-201ENST00000333213 ZNF98A6NK75 572 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 APOA2P02652 100 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 H2BFWTQ7Z2G1 175 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 RXFP4Q8TDU9 374 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 TUBA4BQ9H853 241 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 CACFD1Q9UGQ2 172 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 RCL1Q9Y2P8 373 aaKnown RBP18.74■□□□□ 0.59
TSEN54-201ENST00000333213 CCDC168Q8NDH2 2452 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 TRAV3A0A0B4J244 114 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 CRYBA1P05813 215 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 SPP1P10451 314 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 NKX2-1P43699 371 aaPredicted RBP18.74■□□□□ 0.59
TSEN54-201ENST00000333213 POLR2GP62487 172 aaKnown RBP eCLIP18.74■□□□□ 0.59
TSEN54-201ENST00000333213 PDPNQ86YL7 162 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 PIP4P2Q8N4L2 257 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 LINC01356Q8N9X3 169 aa18.74■□□□□ 0.59
TSEN54-201ENST00000333213 COLCA2A8K830 154 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 AVPP01185 164 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 SNCAP37840 140 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 POU2AF1Q16633 256 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 RNF212Q495C1 297 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 TMEM177Q53S58 311 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 MOB3BQ86TA1 216 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 MAGT1Q9H0U3 335 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 TMEM140Q9NV12 185 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 COA4Q9NYJ1 87 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 WASHC3Q9Y3C0 194 aa18.73■□□□□ 0.59
TSEN54-201ENST00000333213 ST8SIA3O43173 380 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 TSPAN15O95858 294 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 SSX2Q16385 188 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 OR4A47Q6IF82 309 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 FLYWCH2Q96CP2 140 aaKnown RBP18.72■□□□□ 0.59
TSEN54-201ENST00000333213 C11orf1Q9H5F2 150 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 C7orf69Q9H7B7 122 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 TIMM23O14925 209 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 TXNL1O43396 289 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 IL6RP08887 468 aaPredicted RBP18.72■□□□□ 0.59
TSEN54-201ENST00000333213 MC5RP33032 325 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 S100A12P80511 92 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 TMEM249Q2WGJ8 235 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 OR4C13Q8NGP0 309 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 OSR1Q8TAX0 266 aaPredicted RBP18.72■□□□□ 0.59
TSEN54-201ENST00000333213 CFHR4Q92496 578 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 ITPR3Q14573 2671 aa18.72■□□□□ 0.59
TSEN54-201ENST00000333213 TRAV20A0A0B4J274 112 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 A0A1B0GW64 132 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 IGHV4-31P0DP07 118 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 CEACAM3P40198 252 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 MINOS1Q5TGZ0 78 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 HARBI1Q96MB7 349 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 SMDT1Q9H4I9 107 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 MINOS1-NBL1R4GNA1 71 aa18.71■□□□□ 0.59
TSEN54-201ENST00000333213 IGHV3OR16-10A0A075B7F0 116 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 TMEM50AO95807 157 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 SAA4P35542 130 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 LGALS4P56470 323 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 RAB5BP61020 215 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 ERVK-16P61578 105 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 RELBQ01201 579 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 FBLN7Q53RD9 439 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 CIARTQ8N365 385 aaPredicted RBP18.7■□□□□ 0.58
TSEN54-201ENST00000333213 LFNGQ8NES3 379 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 SCRT1Q9BWW7 348 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 C9JQL5 133 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 HRASP01112 189 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 IGLV2-23P01705 113 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 OR2B8PP59922 312 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 CTAG1AP78358 180 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 HABP2Q14520 560 aaPredicted RBP18.7■□□□□ 0.58
TSEN54-201ENST00000333213 RUSC1-AS1Q66K80 236 aa18.7■□□□□ 0.58
TSEN54-201ENST00000333213 TRAV40A0A0B4J280 105 aa18.69■□□□□ 0.58
TSEN54-201ENST00000333213 TGFAP01135 160 aa18.69■□□□□ 0.58
TSEN54-201ENST00000333213 SAA1P0DJI8 122 aaPredicted RBP18.69■□□□□ 0.58
TSEN54-201ENST00000333213 IGHV4-38-2P0DP08 117 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms