RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 STARD4Q96DR4 205 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 WDYHV1Q96HA8 205 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 SMIM8Q96KF7 97 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 GUCD1Q96NT3 240 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 PCNX3Q9H6A9 2034 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 AGAP20933 346 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 HSPE1P61604 102 aaKnown RBP13.88□□□□□ -0.19
CLIP4-201ENST00000320081 DMRTA2Q96SC8 542 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 SPTBN4Q9H254 2564 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 PDE6DO43924 150 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 KIR2DS2P43631 304 aa13.88□□□□□ -0.19
CLIP4-201ENST00000320081 RPL27AP46776 148 aaKnown RBP13.88□□□□□ -0.19
CLIP4-201ENST00000320081 CA2P00918 260 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 SRP19P09132 144 aaKnown RBP13.87□□□□□ -0.19
CLIP4-201ENST00000320081 ZNF600Q6ZNG1 722 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 ST6GALNAC3Q8NDV1 305 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 ANAPC16Q96DE5 110 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 IL19Q9UHD0 177 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 CDX4O14627 284 aaPredicted RBP13.87□□□□□ -0.19
CLIP4-201ENST00000320081 FOXA3P55318 350 aaPredicted RBP13.87□□□□□ -0.19
CLIP4-201ENST00000320081 WFDC3Q8IUB2 231 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 RAB1BQ9H0U4 201 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 OR51M1Q9H341 326 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 CGAP01215 116 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 HIVEP3Q5T1R4 2406 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 IGFBP2P18065 325 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 STPG3Q8N7X2 389 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 Q8WTZ3 238 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 AUP1Q9Y679 476 aa13.87□□□□□ -0.19
CLIP4-201ENST00000320081 IGHV2OR16-5A0A0B4J2B6 119 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 COX5BP10606 129 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 CHRDL1Q9BU40 450 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 HTTP42858 3142 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 USP9YO00507 2555 aaPredicted RBP13.86□□□□□ -0.19
CLIP4-201ENST00000320081 HIST1H1BP16401 226 aaKnown RBP13.86□□□□□ -0.19
CLIP4-201ENST00000320081 CD40P25942 277 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 LHFPL1Q86WI0 220 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 C5orf17Q8NAS9 161 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 ABHD17AQ96GS6 310 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 CYTL1Q9NRR1 136 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 UNC80Q8N2C7 3258 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 NDUFS6O75380 124 aaKnown RBP13.86□□□□□ -0.19
CLIP4-201ENST00000320081 CCL1P22362 96 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 OR8B3Q8NGG8 313 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 OR8B2Q96RD0 313 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 NABP2Q9BQ15 211 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 NPCDR1Q9BY65 106 aa13.86□□□□□ -0.19
CLIP4-201ENST00000320081 METTL1Q9UBP6 276 aaKnown RBP13.86□□□□□ -0.19
CLIP4-201ENST00000320081 PTTG1IPP53801 180 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 TMEM183BQ1AE95 376 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 LINC00470Q9BZP3 86 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 A0A1B0GV90 55 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 IBA57Q5T440 356 aaKnown RBP13.85□□□□□ -0.19
CLIP4-201ENST00000320081 NEU1Q99519 415 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 VPS25Q9BRG1 176 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 CBLN4Q9NTU7 201 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 F5H697 171 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 NAPSAO96009 420 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 IGHV3-23P01764 117 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 ERVFRD-1P60508 538 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 ETFRF1Q6IPR1 90 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 C20orf204Q6ZNR8 217 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 TECTAO75443 2155 aa13.85□□□□□ -0.19
CLIP4-201ENST00000320081 NTN3O00634 580 aaPredicted RBP13.84□□□□□ -0.19
CLIP4-201ENST00000320081 SAXO1Q8IYX7 474 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 ZNF525Q8N782 197 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 GGACTQ9BVM4 153 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 CARHSP1Q9Y2V2 147 aaKnown RBP13.84□□□□□ -0.19
CLIP4-201ENST00000320081 SCO2A0A1W2PP80 73 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 KBTBD11O94819 623 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 ZNF25P17030 456 aaPredicted RBP13.84□□□□□ -0.19
CLIP4-201ENST00000320081 NTF4P34130 210 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 GFI1BQ5VTD9 330 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 CYB5R2Q6BCY4 276 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 EIF4E3Q8N5X7 224 aaKnown RBP13.84□□□□□ -0.19
CLIP4-201ENST00000320081 OR8A1Q8NGG7 326 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 TMEM171Q8WVE6 324 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 CBY3A6NI87 242 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 C9JQL5 133 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 TCF23Q7RTU1 214 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 IGLV3-32A0A0A0MS00 114 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 CTSSP25774 331 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 KLHDC1Q8N7A1 406 aa13.84□□□□□ -0.19
CLIP4-201ENST00000320081 GTF3AQ92664 365 aaKnown RBP13.84□□□□□ -0.19
CLIP4-201ENST00000320081 ANKRD11Q6UB99 2663 aaPredicted RBP13.83□□□□□ -0.2
CLIP4-201ENST00000320081 ELOA3CA0A087WX78 387 aaPredicted RBP13.83□□□□□ -0.2
CLIP4-201ENST00000320081 TRBV6-7A0A0A0MS04 114 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 QRFPP83859 136 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 FAM117AQ9C073 453 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 A0A0G2JRQ6 117 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 IL18BPO95998 194 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 MYOD1P15172 320 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 C10orf55Q5SWW7 151 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 TMEM45BQ96B21 275 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 FBLN5Q9UBX5 448 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 DIRC3C9JPN6 131 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 HYPMO75409 117 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 ANOS1P23352 680 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms