RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 LIAT1Q6ZQX7 453 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 LRTM2Q8N967 370 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 INO80EQ8NBZ0 244 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-201ENST00000311487 OR5AC2Q9NZP5 309 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 METTL1Q9UBP6 276 aaKnown RBP14.45□□□□□ -0.1
HMGA1-201ENST00000311487 POMT1Q9Y6A1 747 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 ATRQ13535 2644 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 TRAV3A0A0B4J244 114 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 KANTRA0A1W2PQU2 76 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 H0Y980 276 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 NBR2O15453 112 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 KCNAB3O43448 404 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 SPDEFO95238 335 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 RAB14P61106 215 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 PSG5Q15238 335 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 IAH1Q2TAA2 248 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-201ENST00000311487 TMEM177Q53S58 311 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 FAM219AQ8IW50 185 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 Q8N9W7 124 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 DMBX1Q8NFW5 382 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 SCARB1Q8WTV0 552 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 GSKIPQ9P0R6 139 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 PITPNC1Q9UKF7 332 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 NSG2Q9Y328 171 aa14.45□□□□□ -0.1
HMGA1-201ENST00000311487 LINC01548A6NM66 108 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 HPRT1P00492 218 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 IFNA21P01568 189 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 SAA1P0DJI8 122 aaPredicted RBP14.44□□□□□ -0.1
HMGA1-201ENST00000311487 MYOD1P15172 320 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 GNB1P62873 340 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 R3HDM4Q96D70 268 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 RRNAD1Q96FB5 475 aaKnown RBP14.44□□□□□ -0.1
HMGA1-201ENST00000311487 RHOVQ96L33 236 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 CITED4Q96RK1 184 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 TMEM222Q9H0R3 208 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 SIGLEC9Q9Y336 463 aa14.44□□□□□ -0.1
HMGA1-201ENST00000311487 OPN1MWP04001 364 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 OPN1MW2P0DN77 364 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 OPN1MW3P0DN78 364 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 RRASP10301 218 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 TMEM95Q3KNT9 176 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 TMEM268Q5VZI3 342 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 C5orf56Q8N8D9 126 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 ST8SIA2Q92186 375 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 MOB4Q9Y3A3 225 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 FBN1P35555 2871 aaKnown RBP14.43□□□□□ -0.1
HMGA1-201ENST00000311487 TNCP24821 2201 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 MARCH11A6NNE9 402 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 RRHO14718 337 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 RLN2P04090 185 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 KIR2DS2P43631 304 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 RELBQ01201 579 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 LGI3Q8N145 548 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 FAM71E2Q8N5Q1 922 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 CD300LFQ8TDQ1 290 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 KIAA1456Q9P272 454 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 LINC00527Q9UJ94 153 aa14.43□□□□□ -0.1
HMGA1-201ENST00000311487 RNASE1P07998 156 aaKnown RBP14.42□□□□□ -0.1
HMGA1-201ENST00000311487 APELAP0DMC3 54 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 S100A10P60903 97 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 DHRS7BQ6IAN0 325 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-201ENST00000311487 OR4A47Q6IF82 309 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 LYZL2Q7Z4W2 148 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 ZNF695Q8IW36 515 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 SELENOHQ8IZQ5 122 aaKnown RBP14.42□□□□□ -0.1
HMGA1-201ENST00000311487 OR1S1Q8NH92 325 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 OSR1Q8TAX0 266 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-201ENST00000311487 RASL11BQ9BPW5 248 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 HSPB9Q9BQS6 159 aa14.42□□□□□ -0.1
HMGA1-201ENST00000311487 A0A0G2JRQ6 117 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 IGKV1-5P01602 117 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 PET100P0DJ07 73 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 UCP1P25874 307 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 TMEM86BQ8N661 226 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 NPBQ8NG41 125 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 JMJD8Q96S16 334 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 TSNAXQ99598 290 aaKnown RBP14.41□□□□□ -0.1
HMGA1-201ENST00000311487 ZNF471Q9BX82 626 aaPredicted RBP14.41□□□□□ -0.1
HMGA1-201ENST00000311487 PLEKHA2Q9HB19 425 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 TMEM140Q9NV12 185 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 MSGN1A6NI15 193 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 CLDN34H7C241 214 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 RBFOX2O43251 390 aaKnown RBP eCLIP14.41□□□□□ -0.11e-11■■□□□ 12.4
HMGA1-201ENST00000311487 CDS2O95674 445 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 NMBP08949 121 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 NQO2P16083 231 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 AKR1C2P52895 323 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 C5orf64Q2M2E5 130 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 SLC35G3Q8N808 338 aa14.41□□□□□ -0.1
HMGA1-201ENST00000311487 FAM103A1Q9BTL3 118 aaKnown RBP14.41□□□□□ -0.1
HMGA1-201ENST00000311487 TRIM77I1YAP6 450 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 NXPH3O95157 252 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 HRASP01112 189 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 CRYBA1P05813 215 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 OR9G9P0C7N8 305 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 LGALS7P47929 136 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 OR2B8PP59922 312 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 MRGPRG-AS1Q2M3A8 158 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 COMMD7Q86VX2 200 aa14.4□□□□□ -0.1
HMGA1-201ENST00000311487 RNASE11Q8TAA1 199 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms