RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ZBTB34Q8NCN2 500 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 ZNF439Q8NDP4 499 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 TAAR6Q96RI8 345 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 CDC42EP3Q9UKI2 254 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 TRGV10A0A0A0MS01 117 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 MT-CO3P00414 261 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 CLDN18P56856 261 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 EFNB3Q15768 340 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 MRPS16Q9Y3D3 137 aaKnown RBP10.82□□□□□ -0.68
TVP23A-201ENST00000299866 LOC102723996A0A087X1L8 192 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 SAA2-SAA4A0A096LPE2 208 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 FCGR3BO75015 233 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 APCSP02743 223 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 GABRA2P47869 451 aa10.82□□□□□ -0.68
TVP23A-201ENST00000299866 CXorf67Q86X51 503 aaPredicted RBP10.82□□□□□ -0.68
TVP23A-201ENST00000299866 IGHV2-26A0A0B4J1V2 119 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 IGHV2-70DA0A0C4DH43 119 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 HSBP1O75506 76 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 MT-CO2P00403 227 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 NHLRC2Q8NBF2 726 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 OR4A16Q8NH70 328 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 TMEM30CPA0ZSE6 113 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 C9JCJ5 164 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 MPDU1O75352 247 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 IGHV3-13P01766 116 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 IGHV3-7P01780 117 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 AMY1AP04745 511 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 IGLL1P15814 213 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 USF1P22415 310 aaPredicted RBP10.81□□□□□ -0.68
TVP23A-201ENST00000299866 SSTR5P35346 364 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 PSG5Q15238 335 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 TNXAQ16473 311 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 LDLRAD2Q5SZI1 272 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 C19orf35Q6ZS72 473 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 MIR17HGQ75NE6 70 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 RTL8AQ9BWD3 113 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 SSBP3Q9BWW4 388 aaPredicted RBP10.81□□□□□ -0.68
TVP23A-201ENST00000299866 DOCK10Q96BY6 2186 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 ADAMTS20P59510 1910 aa10.81□□□□□ -0.68
TVP23A-201ENST00000299866 PINLYPA6NC86 204 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 WNT9BO14905 357 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 HAND1O96004 215 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 LTBRP36941 435 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 RHOBP62745 196 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 SSPNQ14714 243 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 TIGITQ495A1 244 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 STPG3Q8N7X2 389 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 NCKAP5O14513 1909 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 M0R2Z0 102 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 EIF4EBP1Q13541 118 aaPredicted RBP10.8□□□□□ -0.68
TVP23A-201ENST00000299866 CLCF1Q9UBD9 225 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 TRAV3A0A0B4J244 114 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 IGLC7A0M8Q6 106 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 SLAQ13239 276 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 GCNT2Q8N0V5 402 aa10.8□□□□□ -0.68
TVP23A-201ENST00000299866 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
TVP23A-201ENST00000299866 TRAV9-2A0A087WT02 112 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 IGHV1-69-2A0A0G2JMI3 117 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 HLA-DQA1P01909 254 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 PMCHL1Q16048 86 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 ALKBH6Q3KRA9 238 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 RNASEKQ6P5S7 137 aaKnown RBP10.79□□□□□ -0.68
TVP23A-201ENST00000299866 ZNF826PQ6ZT77 177 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 FREM2Q5SZK8 3169 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 TNRC6AQ8NDV7 1962 aaKnown RBP10.79□□□□□ -0.68
TVP23A-201ENST00000299866 SS18L1O75177 396 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-201ENST00000299866 KLF7O75840 302 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-201ENST00000299866 ARR3P36575 388 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 C18orf32Q8TCD1 76 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 C11orf52Q96A22 123 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 DCTN5Q9BTE1 182 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 POLDIP2Q9Y2S7 368 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 GPR6P46095 362 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-201ENST00000299866 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 MORN2Q502X0 79 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 IBA57Q5T440 356 aaKnown RBP10.79□□□□□ -0.68
TVP23A-201ENST00000299866 FAM216AQ8WUB2 273 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 HSD17B10Q99714 261 aaKnown RBP10.79□□□□□ -0.68
TVP23A-201ENST00000299866 NPVFQ9HCQ7 196 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 DNAJC13O75165 2243 aa10.79□□□□□ -0.68
TVP23A-201ENST00000299866 OR10J4P0C629 311 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 PSG1P11464 419 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 NRN1LQ496H8 165 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 MPV17L2Q567V2 206 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 SLC24A4Q8NFF2 622 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 OR4F17Q8NGA8 305 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 OR5B3Q8NH48 314 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 ZNF596Q8TC21 504 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 FAM168AQ92567 244 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 C1orf159Q96HA4 380 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 HINT2Q9BX68 163 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 WASHC3Q9Y3C0 194 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 AHRRA9YTQ3 701 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 CELA3AP09093 270 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 CCL4P13236 92 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 ERVK11-1P61568 191 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 FOXF2Q12947 444 aa10.78□□□□□ -0.68
TVP23A-201ENST00000299866 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms