RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 RAB2AP61019 212 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 TMEM177Q53S58 311 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 AVPI1Q5T686 147 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 NABP2Q9BQ15 211 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 AIFM2Q9BRQ8 373 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 PRNDQ9UKY0 176 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 UBR5O95071 2799 aaPredicted RBP12.97□□□□□ -0.33
ITGA4-201ENST00000233573 SAA1P0DJI8 122 aaPredicted RBP12.97□□□□□ -0.33
ITGA4-201ENST00000233573 CDKN1AP38936 164 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 HOXA1P49639 335 aaPredicted RBP12.97□□□□□ -0.33
ITGA4-201ENST00000233573 HAGHQ16775 308 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 TMEM88Q6PEY1 159 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 ETV3LQ6ZN32 361 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 OR10X1Q8NGY0 326 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 GGACTQ9BVM4 153 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 RAB1BQ9H0U4 201 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 TMEM133Q9H2Q1 129 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 OR51B2Q9Y5P1 312 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 A6NNC1 897 aa12.96□□□□□ -0.33
ITGA4-201ENST00000233573 APOA2P02652 100 aa12.96□□□□□ -0.33
ITGA4-201ENST00000233573 SRP19P09132 144 aaKnown RBP12.96□□□□□ -0.33
ITGA4-201ENST00000233573 CD1BP29016 333 aa12.96□□□□□ -0.33
ITGA4-201ENST00000233573 REG1BP48304 166 aa12.96□□□□□ -0.33
ITGA4-201ENST00000233573 DTX2Q86UW9 622 aa12.96□□□□□ -0.33
ITGA4-201ENST00000233573 C8orf46Q8TAG6 207 aa12.96□□□□□ -0.33
ITGA4-201ENST00000233573 KBTBD11O94819 623 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 HNF4GQ14541 408 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 ZNF787Q6DD87 383 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 FAM122CQ6P4D5 195 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 LCN15Q6UWW0 184 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 CBLN2Q8IUK8 224 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 LOC102723971A0A1B0GUV8 181 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 NDUFS7O75251 213 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 HSPB1P04792 205 aaKnown RBP12.95□□□□□ -0.34
ITGA4-201ENST00000233573 DLK1P80370 383 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 PRCDQ00LT1 54 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 KHDC3LQ587J8 217 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 TREML4Q6UXN2 200 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 PDPNQ86YL7 162 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 SLC24A4Q8NFF2 622 aa12.95□□□□□ -0.34
ITGA4-201ENST00000233573 TEX50A0A1B0GTY4 177 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 OR13C7P0DN81 318 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 PMS2P11Q13670 270 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 LHX4Q969G2 390 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 C1orf159Q96HA4 380 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 HARBI1Q96MB7 349 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 PCGF1Q9BSM1 259 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
ITGA4-201ENST00000233573 TNCP24821 2201 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 TACC2O95359 2948 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 MALRD1Q5VYJ5 2156 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 CRYBG3Q68DQ2 2970 aa12.94□□□□□ -0.34
ITGA4-201ENST00000233573 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 H7C2Y5 167 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 IGLV1-47P01700 117 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 IGLV2-23P01705 113 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 MBP02144 154 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 RBP4P02753 201 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 NPY1RP25929 384 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 FGF8P55075 233 aaPredicted RBP12.93□□□□□ -0.34
ITGA4-201ENST00000233573 FFAR4Q5NUL3 377 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 WDR25Q64LD2 544 aaPredicted RBP12.93□□□□□ -0.34
ITGA4-201ENST00000233573 NEU4Q8WWR8 484 aaPredicted RBP12.93□□□□□ -0.34
ITGA4-201ENST00000233573 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 FLYWCH2Q96CP2 140 aaKnown RBP12.93□□□□□ -0.34
ITGA4-201ENST00000233573 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 IGHV2-26A0A0B4J1V2 119 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 CA2P00918 260 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 RAB11AP62491 216 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 LY6G5BQ8NDX9 201 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 OR4C13Q8NGP0 309 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 OR5B3Q8NH48 314 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 RXFP4Q8TDU9 374 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 MIOXQ9UGB7 285 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 CHD6Q8TD26 2715 aa12.93□□□□□ -0.34
ITGA4-201ENST00000233573 C17orf112F2Z3M2 114 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 MPDU1O75352 247 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 TSPAN9O75954 239 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 BCL2P10415 239 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 SRSF1Q07955 248 aaKnown RBP eCLIP12.92□□□□□ -0.34
ITGA4-201ENST00000233573 BSXQ3C1V8 233 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 SOHLH1Q5JUK2 328 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 TGIF2LXQ8IUE1 241 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 OR10G4Q8NGN3 311 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 OR10G9Q8NGN4 311 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 OR10G7Q8NGN6 311 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 NEIL1Q96FI4 390 aaPredicted RBP12.92□□□□□ -0.34
ITGA4-201ENST00000233573 FKBP11Q9NYL4 201 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 GNG13Q9P2W3 67 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 LSM4Q9Y4Z0 139 aaKnown RBP12.92□□□□□ -0.34
ITGA4-201ENST00000233573 VPS13CQ709C8 3753 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 LRRK2Q5S007 2527 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 PPIAL4CA0A0B4J2A2 164 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 EIF3GO75821 320 aaKnown RBP eCLIP12.92□□□□□ -0.34
ITGA4-201ENST00000233573 FBP1P09467 338 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 DLX1P56177 255 aa12.92□□□□□ -0.34
ITGA4-201ENST00000233573 HLA-DRB5Q30154 266 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms