RNA–Protein interactions for RNA: ENST00000222812.7

STX1A-201, Transcript of syntaxin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX1A, Length 2,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-201ENST00000222812 IL22RA2Q969J5 263 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 GPR146Q96CH1 333 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 SLC35D1Q9NTN3 355 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 DPM3Q9P2X0 92 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
STX1A-201ENST00000222812 TRAV20A0A0B4J274 112 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 IGHV1-3A0A0C4DH29 117 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 C9JQL5 133 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 SMAD7O15105 426 aaKnown RBP12.1□□□□□ -0.47
STX1A-201ENST00000222812 AGPAT2O15120 278 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 VDAC1P21796 283 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 UBE2E1P51965 193 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 TPTE2P1Q5T6R2 138 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 RUSC1-AS1Q66K80 236 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 FAM71F2Q6NXP2 309 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 SSX9Q7RTT3 188 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 TCTEX1D1Q8N7M0 179 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 DMBX1Q8NFW5 382 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 RPEQ96AT9 228 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 ADTRPQ96IZ2 230 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 RITA1Q96K30 269 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 WFDC1Q9HC57 220 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 BIN3Q9NQY0 253 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 SMCO4Q9NRQ5 59 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 AMMECR1Q9Y4X0 333 aaPredicted RBP12.1□□□□□ -0.47
STX1A-201ENST00000222812 TNCP24821 2201 aa12.1□□□□□ -0.47
STX1A-201ENST00000222812 HPRT1P00492 218 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 IGHV4-38-2P0DP08 117 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 SSX2Q16385 188 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 R3HDM4Q96D70 268 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 BSCL2Q96G97 398 aaPredicted RBP12.09□□□□□ -0.47
STX1A-201ENST00000222812 AJUBAQ96IF1 538 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 CACFD1Q9UGQ2 172 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 PLXNB1O43157 2135 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 BAHCC1Q9P281 2608 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 TRAV40A0A0B4J280 105 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 A0A1W2PPI3 338 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 SRRM4A7MD48 611 aaKnown RBP12.09□□□□□ -0.47
STX1A-201ENST00000222812 NXPH3O95157 252 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 FOLR2P14207 255 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
STX1A-201ENST00000222812 CD300LFQ8TDQ1 290 aa12.09□□□□□ -0.47
STX1A-201ENST00000222812 SOX21Q9Y651 276 aaPredicted RBP12.09□□□□□ -0.47
STX1A-201ENST00000222812 MARCH11A6NNE9 402 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 RBFOX2O43251 390 aaKnown RBP eCLIP12.08□□□□□ -0.483e-8■■■■■ 39.8
STX1A-201ENST00000222812 KIR2DS2P43631 304 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 LGALS4P56470 323 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 MIDNQ504T8 468 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 C15orf54Q8N8G6 183 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 OR4S2Q8NH73 311 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 RXFP4Q8TDU9 374 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 SPIN2AQ99865 258 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 SPIN2BQ9BPZ2 258 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 SCRT1Q9BWW7 348 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 C11orf1Q9H5F2 150 aa12.08□□□□□ -0.48
STX1A-201ENST00000222812 RCL1Q9Y2P8 373 aaKnown RBP12.08□□□□□ -0.48
STX1A-201ENST00000222812 DUXBA0A1W2PPF3 345 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 COLCA2A8K830 154 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 CRYBA1P05813 215 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 P0C879 139 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 CD24P25063 80 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 SAA4P35542 130 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 CAMLGP49069 296 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 FBLN7Q53RD9 439 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 CLEC9AQ6UXN8 241 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 TRAV3A0A0B4J244 114 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 TIMM23O14925 209 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 NPFFO15130 113 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 APOA2P02652 100 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 NHLH2Q02577 135 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 GUK1Q16774 197 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 RTL8BQ17RB0 113 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 KLF17Q5JT82 389 aaPredicted RBP12.07□□□□□ -0.48
STX1A-201ENST00000222812 LFNGQ8NES3 379 aa12.07□□□□□ -0.48
STX1A-201ENST00000222812 LSM10Q969L4 123 aaKnown RBP12.07□□□□□ -0.48
STX1A-201ENST00000222812 ANK3Q12955 4377 aaKnown RBP12.06□□□□□ -0.48
STX1A-201ENST00000222812 A0A1B0GW64 132 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 CEACAM3P40198 252 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 PPT1P50897 306 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 EWSR1Q01844 656 aaKnown RBP eCLIP12.06□□□□□ -0.48
STX1A-201ENST00000222812 ZNF616Q08AN1 781 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 CXorf66Q5JRM2 361 aaPredicted RBP12.06□□□□□ -0.48
STX1A-201ENST00000222812 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 CFHR4Q92496 578 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 WASHC3Q9Y3C0 194 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 MMP24Q9Y5R2 645 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 IGHV1-69DA0A0B4J2H0 117 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 IGHV1-69P01742 117 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 NQO2P16083 231 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
STX1A-201ENST00000222812 ZNF266Q14584 549 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 FLYWCH2Q96CP2 140 aaKnown RBP12.06□□□□□ -0.48
STX1A-201ENST00000222812 PBDC1Q9BVG4 233 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms