RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Lypd8Q9D7S0 255 aa19.06■□□□□ 0.64
Scn1b-201ENSMUST00000098548 CnmdQ9Z1F6 334 aa19.06■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Gm5493S4R2D1 92 aa19.06■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Cmya5Q70KF4 3739 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Igkv1-135A0A0B4J1H7 120 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Gm17677B3GLJ5 116 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Gm15440D3Z3P4 90 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr1348F6VB59 318 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Gm20708H3BKF4 155 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ccl11P48298 97 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Supt4h1aP63271 117 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Gm21943Q5FWD5 227 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Tex261Q62302 196 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr1383Q7TQT2 311 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Tacstd2Q8BGV3 317 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr822Q8VFU1 312 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Naa60Q9DBU2 242 aa19.05■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Nxpe5E0CX47 564 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Hbb-bh0P04443 147 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 PpicP30412 212 aaKnown RBP19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Cdkn1bP46414 197 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Fam219bQ14DQ1 197 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Tgfbr2Q62312 592 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr1000Q7TR99 314 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Tmprss11fQ8BHM9 439 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 IrgcQ8C262 412 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Vmn1r178Q8R2B6 304 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr1170Q8VFG1 316 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ubtd1Q91WB7 227 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Dnajb11Q99KV1 358 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Hils1Q9QYL0 170 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Defb3Q9WTL0 63 aa19.04■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Mrgpra9A0A140T8U8 332 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 eef1akmt3D3YWP0 232 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Fpr2O88536 351 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 NppaP05125 152 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ifna7P06799 190 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Rps2P25444 293 aaKnown RBP19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Foxa3P35584 353 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ccl21aP84444 133 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ccl21bP86792 133 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ccl21cP86793 133 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Cln6Q3U466 308 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ltc4sQ60860 150 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ceacam10Q61400 265 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr1283Q7TQY4 305 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr487Q7TRU9 314 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Scrt2Q8BTH6 311 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 B3gnt8Q8R3I9 389 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Olfr1446Q8VFX4 308 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Wdr77Q99J09 342 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Sytl3Q99N48 607 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Cldn10Q9Z0S6 231 aa19.03■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Med12lQ8BQM9 2157 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Trbv29A0A0G2LB96 114 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 9830107B12RikD3Z5D6 160 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Gm20481G3UXK4 153 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Kcnk3O35111 409 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 H3f3cP02301 136 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Cks2P56390 79 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Spata46Q4FZF2 204 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ifna16Q810G1 189 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Ahsa1Q8BK64 338 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 St3gal6Q8VIB3 329 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Dnajc24Q91ZF0 196 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Lmo1Q924W9 156 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Mansc1Q9CR33 414 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Msmo1Q9CRA4 293 aa19.02■□□□□ 0.64
Scn1b-201ENSMUST00000098548 Map1aQ9QYR6 2776 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Zcchc24B2RVL6 241 aaKnown RBP19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1335B2RVY8 335 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Vmn2r83E9Q0G7 864 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr739E9Q1P0 309 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr902E9Q6Z7 309 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr69E9Q7C5 316 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Foxf2O54743 446 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 P01723 117 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Bpifa2P07743 235 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Igsf6P0C6B7 237 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Cxcl1P12850 96 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Rab3dP35276 219 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Rnd3P61588 244 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Tmem184aQ3UFJ6 425 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 BC147527Q3V185 167 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 MaoaQ64133 526 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Q80W69 301 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Prima1Q810F0 153 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Vrk3Q8K3G5 453 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Vmn1r237Q8R296 289 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr401Q8VFX6 315 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Stoml2Q99JB2 353 aaKnown RBP19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Fxyd6Q9D164 94 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Tmbim7Q9D592 302 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 PipoxQ9D826 390 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Irak1bp1Q9ESJ7 259 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Chst5Q9QUP4 395 aa19.02■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ercc1P07903 298 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Nanos2P60322 136 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ang4Q3TMQ6 144 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm12253Q5NC48 229 aa19.01■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms