RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 TSPAN9O75954 239 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 CRYGBP07316 175 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 RIPPLY3P57055 190 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 GNB1P62873 340 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 SLC35E3Q7Z769 313 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 MMD2Q8IY49 270 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 OR4F5Q8NH21 305 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 COQ8AQ8NI60 647 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 TAF15Q92804 592 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 IL22RA2Q969J5 263 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 SEC22AQ96IW7 307 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 TMEM56Q96MV1 263 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 TMEM56-RWDD3S4R434 201 aa17.11■□□□□ 0.33
TSPAN9-208ENST00000640568 NDUFA7O95182 113 aa17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 CNIH1O95406 144 aa17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 HKR1P10072 659 aa17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 MECP2P51608 486 aaKnown RBP17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 RELBQ01201 579 aa17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 SELENOHQ8IZQ5 122 aaKnown RBP17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 LHFPL5Q8TAF8 219 aa17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 TMEM167AQ8TBQ9 72 aa17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 ABHD5Q8WTS1 349 aa17.1■□□□□ 0.33
TSPAN9-208ENST00000640568 PLXNB1O43157 2135 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 SNAPC5O75971 98 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 DHFRP00374 187 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 SPNP16150 400 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 VDAC2P45880 294 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 TNXAQ16473 311 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 PRSS8Q16651 343 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 Q6ZS46 218 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 FOXRED2Q8IWF2 684 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 HSPB9Q9BQS6 159 aa17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 ZNF430Q9H8G1 570 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-208ENST00000640568 FCN1O00602 326 aa17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 IGHG2P01859 326 aa17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 RPL8P62917 257 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 SLC35G3Q8N808 338 aa17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 OR52B4Q8NGK2 314 aa17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 MARVELD1Q9BSK0 173 aa17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 GPN1Q9HCN4 374 aaPredicted RBP17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 C2CD3Q4AC94 2353 aa17.08■□□□□ 0.32
TSPAN9-208ENST00000640568 IGHV7-81A0A0B4J1V7 117 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 UPK2O00526 184 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 PRAF2O60831 178 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 RBMXL2O75526 392 aaKnown RBP17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 DUS4LO95620 317 aaKnown RBP17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 PJVKQ0ZLH3 352 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 ANKRD55Q3KP44 614 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 KRTAP24-1Q3LI83 254 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 ZNF562Q6V9R5 426 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 FAM219AQ8IW50 185 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 Q8N2B8 174 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 OR4A16Q8NH70 328 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 TMEM158Q8WZ71 300 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 PHB2Q99623 299 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 SEC22CQ9BRL7 303 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 C16orf95Q9H693 158 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 PARP11Q9NR21 331 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 MMP24Q9Y5R2 645 aa17.07■□□□□ 0.32
TSPAN9-208ENST00000640568 TNCP24821 2201 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 A0A0B4J2A0 478 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 DUXBA0A1W2PPF3 345 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 IGKV1-5P01602 117 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 IL5P05113 134 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 MAS1LP35410 378 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 CX3CL1P78423 397 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 FOXL1Q12952 345 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 FXYD3Q14802 87 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 TMEM95Q3KNT9 176 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 CADM3Q8N126 398 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 ZNF431Q8TF32 576 aaPredicted RBP17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 ARPC1AQ92747 370 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 OR51J1Q9H342 316 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 SHPKQ9UHJ6 478 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 NF1P21359 2839 aa17.06■□□□□ 0.32
TSPAN9-208ENST00000640568 OR9G9P0C7N8 305 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 HLA-GP17693 338 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 VDAC1P21796 283 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 LRTM2Q8N967 370 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 LSM10Q969L4 123 aaKnown RBP17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 NSG2Q9Y328 171 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 TRAV3A0A0B4J244 114 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 AP4M1O00189 453 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 LYZL2Q7Z4W2 148 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 LINC01006Q8NI28 216 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 GRPEL2Q8TAA5 225 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 MITD1Q8WV92 249 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 C19orf24Q9BVV8 132 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 COMMD5Q9GZQ3 224 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 FKBP11Q9NYL4 201 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 PRNDQ9UKY0 176 aa17.05■□□□□ 0.32
TSPAN9-208ENST00000640568 TET2Q6N021 2002 aaPredicted RBP17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 A0A1B0GUS0 222 aa17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 ATP6V0E1O15342 81 aa17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 IL6RP08887 468 aaPredicted RBP17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 HOXB5P09067 269 aa17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 OR2B8PP59922 312 aa17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 NDPQ00604 133 aa17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 MRGPRG-AS1Q2M3A8 158 aa17.04■□□□□ 0.32
TSPAN9-208ENST00000640568 UXS1Q8NBZ7 420 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms