RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 DHRS7BQ6IAN0 325 aaPredicted RBP17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 EIF4E3Q8N5X7 224 aaKnown RBP17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 FAM213BQ8TBF2 198 aa17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 IGFBPL1Q8WX77 278 aa17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 RITA1Q96K30 269 aa17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 TSNAXQ99598 290 aaKnown RBP17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 HINT2Q9BX68 163 aa17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 TMEM14BQ9NUH8 114 aa17.56■□□□□ 0.4
CHRNA7-228ENST00000637519 IFNA5P01569 189 aa17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 ZFP36P26651 326 aaKnown RBP17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 VDAC2P45880 294 aaPredicted RBP17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 KLRD1Q13241 179 aa17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 BTNL8Q6UX41 500 aa17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 ZNF429Q86V71 674 aa17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 BPESC1Q9GZL8 116 aa17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 HEYLQ9NQ87 328 aaPredicted RBP17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 PARP11Q9NR21 331 aa17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 MMP26Q9NRE1 261 aa17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 FOXA2Q9Y261 457 aaPredicted RBP17.55■□□□□ 0.4
CHRNA7-228ENST00000637519 OVOL3O00110 214 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 ARG1P05089 322 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 FLYWCH2Q96CP2 140 aaKnown RBP17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 OR51B2Q9Y5P1 312 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 IGHV4-39P01824 125 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 FAM71F2Q6NXP2 309 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 BPIFCQ8NFQ6 507 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 OR4P4Q8NGL7 312 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 OR52E5Q8NH55 327 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 TMEM170AQ8WVE7 144 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 FAM96BQ9Y3D0 163 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 VPS13CQ709C8 3753 aa17.54■□□□□ 0.4
CHRNA7-228ENST00000637519 BUB1B-PAK6H3BSN5 160 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 UPK2O00526 184 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 RRHO14718 337 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 SCO1O75880 301 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 IFNA10P01566 189 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 IL6RP08887 468 aaPredicted RBP17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 PAX6P26367 422 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 BLOC1S1P78537 153 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 SRSF1Q07955 248 aaKnown RBP eCLIP17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 LDLRAD2Q5SZI1 272 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 LHX4Q969G2 390 aa17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 NARS2Q96I59 477 aaKnown RBP17.53■□□□□ 0.4
CHRNA7-228ENST00000637519 ZP3P21754 424 aa17.52■□□□□ 0.4
CHRNA7-228ENST00000637519 ARHGDIBP52566 201 aa17.52■□□□□ 0.4
CHRNA7-228ENST00000637519 OR10P1Q8NGE3 313 aa17.52■□□□□ 0.4
CHRNA7-228ENST00000637519 OSR1Q8TAX0 266 aaPredicted RBP17.52■□□□□ 0.4
CHRNA7-228ENST00000637519 WASHC3Q9Y3C0 194 aa17.52■□□□□ 0.4
CHRNA7-228ENST00000637519 A0A1W2PRD5 423 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 A0A1W2PRF3 423 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 A0A1W2PRM7 423 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 ENSAO43768 121 aaKnown RBP17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 RBP4P02753 201 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 IL3RAP26951 378 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 PRRX1P54821 245 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 LCN2P80188 198 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 PJVKQ0ZLH3 352 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 TUSC1Q2TAM9 212 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 LRRC75BQ2VPJ9 315 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 PDLIM3Q53GG5 364 aaPredicted RBP17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 TMEM177Q53S58 311 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 SCGB1C1Q8TD33 95 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 GNPNAT1Q96EK6 184 aaPredicted RBP17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 WDR61Q9GZS3 305 aaKnown RBP17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 TPSG1Q9NRR2 321 aa17.52■□□□□ 0.39
CHRNA7-228ENST00000637519 IGHV2-5P01817 119 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 F2RL1P55085 397 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 HSPE1P61604 102 aaKnown RBP17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 PDPNQ86YL7 162 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 PUSL1Q8N0Z8 303 aaKnown RBP17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 OR4C13Q8NGP0 309 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 HIPK2Q9H2X6 1198 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 VSIRQ9H7M9 311 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 TNCP24821 2201 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 BEND2Q8NDZ0 799 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 TNFRSF14Q92956 283 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 MARVELD3Q96A59 401 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 CLCC1Q96S66 551 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 CCL19Q99731 98 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 BET1LQ9NYM9 111 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 PRNDQ9UKY0 176 aa17.51■□□□□ 0.39
CHRNA7-228ENST00000637519 CRYBG3Q68DQ2 2970 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 CSMD2Q7Z408 3487 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 hCG_1809904A0A1W2PP81 198 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 A0A1W2PPE2 198 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 A0A1W2PR64 198 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 A0A1W2PRV1 198 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 A1L4Q6 167 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 RAB19A4D1S5 217 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 KBTBD11O94819 623 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 IGLV2-23P01705 113 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 TLE4Q04727 773 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 MS4A7Q9GZW8 240 aaPredicted RBP17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 MED13LQ71F56 2210 aa17.5■□□□□ 0.39
CHRNA7-228ENST00000637519 IGHV1-3A0A0C4DH29 117 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 OR8U8P0C7N1 319 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 CNTFRP26992 372 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 C10orf55Q5SWW7 151 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 IL34Q6ZMJ4 242 aa17.49■□□□□ 0.39
CHRNA7-228ENST00000637519 MOB3BQ86TA1 216 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms