RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 RPS19P39019 145 aaKnown RBP14.51□□□□□ -0.09
CLN6-221ENST00000637494 C10orf55Q5SWW7 151 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 SSX9Q7RTT3 188 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 SGPP2Q8IWX5 399 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 SPAG16Q8N0X2 631 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 OR4A5Q8NH83 315 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 YIPF6Q96EC8 236 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 HRASLSQ9HDD0 168 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 EHFQ9NZC4 300 aa14.51□□□□□ -0.09
CLN6-221ENST00000637494 TRBV9A0A0B4J1U6 114 aa14.5□□□□□ -0.09
CLN6-221ENST00000637494 RBFOX2O43251 390 aaKnown RBP eCLIP14.5□□□□□ -0.09
CLN6-221ENST00000637494 TGFBR1P36897 503 aa14.5□□□□□ -0.09
CLN6-221ENST00000637494 RPL8P62917 257 aaKnown RBP14.5□□□□□ -0.09
CLN6-221ENST00000637494 LCN12Q6JVE5 192 aa14.5□□□□□ -0.09
CLN6-221ENST00000637494 HAPLN4Q86UW8 402 aa14.5□□□□□ -0.09
CLN6-221ENST00000637494 TMEM17Q86X19 198 aa14.5□□□□□ -0.09
CLN6-221ENST00000637494 CD300LFQ8TDQ1 290 aa14.5□□□□□ -0.09
CLN6-221ENST00000637494 KCTD12Q96CX2 325 aaKnown RBP14.5□□□□□ -0.09
CLN6-221ENST00000637494 ZMAT4Q9H898 229 aa14.5□□□□□ -0.09
CLN6-221ENST00000637494 HMX3A6NHT5 357 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 TRIM64CA6NLI5 447 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 NPIPB5A8MRT5 1133 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 SULT1C2O00338 296 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 OR2J3O76001 311 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 HPRT1P00492 218 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 TRBV12-3P01733 135 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 FRMD6-AS1P0C7T7 363 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 AADACL3Q5VUY0 350 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 GPHA2Q96T91 129 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 SLC2A9Q9NRM0 540 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 BET1LQ9NYM9 111 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 COL7A1Q02388 2944 aa14.49□□□□□ -0.09
CLN6-221ENST00000637494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.48□□□□□ -0.09
CLN6-221ENST00000637494 SMIM31A0A1B0GVY4 71 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 TEX22C9J3V5 150 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 DEFA4P12838 97 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 NQO2P16083 231 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 HIST1H1BP16401 226 aaKnown RBP14.48□□□□□ -0.09
CLN6-221ENST00000637494 PRSS3P35030 304 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 TAS2R31P59538 309 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 TAS2R46P59540 309 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 TAS2R20P59543 309 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 ZNF45Q02386 682 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 C15orf32Q32M92 178 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 OR4A47Q6IF82 309 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 GTSCR1Q86UQ5 136 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 SBSPONQ8IVN8 264 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 OR5H2Q8NGV7 314 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 SIGLEC8Q9NYZ4 499 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 FBXL7Q9UJT9 491 aa14.48□□□□□ -0.09
CLN6-221ENST00000637494 IL6RP08887 468 aaPredicted RBP14.47□□□□□ -0.09
CLN6-221ENST00000637494 ZNF735P0CB33 412 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 HLA-GP17693 338 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 BRWD1-AS2P59051 145 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 ERVK-16P61578 105 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 ZNF818PQ6ZRF7 136 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 Q8N402 240 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 DMBX1Q8NFW5 382 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 OR51H1Q8NH63 302 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 SLC25A46Q96AG3 418 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 COMMD5Q9GZQ3 224 aa14.47□□□□□ -0.09
CLN6-221ENST00000637494 SORL1Q92673 2214 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 BMPR1BO00238 502 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 RBMXL2O75526 392 aaKnown RBP14.46□□□□□ -0.09
CLN6-221ENST00000637494 CSN3P07498 182 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 PSMB6P28072 239 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 CMTM1Q8IZ96 169 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 OR2K2Q8NGT1 345 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 ZNF2Q9BSG1 426 aaPredicted RBP14.46□□□□□ -0.09
CLN6-221ENST00000637494 COMMD3Q9UBI1 195 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 ADAM30Q9UKF2 790 aa14.46□□□□□ -0.09
CLN6-221ENST00000637494 CYB5BO43169 146 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 GGCTO75223 188 aaKnown RBP14.45□□□□□ -0.1
CLN6-221ENST00000637494 PMP2P02689 132 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 IGHV4-30-4P0DP06 118 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 S100GP29377 79 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 RFX2P48378 723 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 DHRS11Q6UWP2 260 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 IL34Q6ZMJ4 242 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 OR6F1Q8NGZ6 308 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 EEF1AKMT3Q96AZ1 226 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 CMTM3Q96MX0 182 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 RCHY1Q96PM5 261 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 FUNDC2Q9BWH2 189 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 PLEKHA2Q9HB19 425 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 COMMD9Q9P000 198 aa14.45□□□□□ -0.1
CLN6-221ENST00000637494 CRYGCP07315 174 aa14.44□□□□□ -0.1
CLN6-221ENST00000637494 DYNLRB2Q8TF09 96 aa14.44□□□□□ -0.1
CLN6-221ENST00000637494 MOB3AQ96BX8 217 aa14.44□□□□□ -0.1
CLN6-221ENST00000637494 THYN1Q9P016 225 aa14.44□□□□□ -0.1
CLN6-221ENST00000637494 E7EUB6 86 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 UPK2O00526 184 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 APOA1P02647 267 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 AREGP15514 252 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 CTRB1P17538 263 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 GNRHRP30968 328 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 ARL3P36405 182 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 TSPAN5P62079 268 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 POU2AF1Q16633 256 aa14.43□□□□□ -0.1
CLN6-221ENST00000637494 CTRB2Q6GPI1 263 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms