RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 ACTL6BO94805 426 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 GADD45GO95257 159 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 ZNF688P0C7X2 276 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 OCM2P0CE71 109 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 OCMP0CE72 109 aaPredicted RBP3.91□□□□□ -1.78
LINC00649-220ENST00000628906 M6PRP20645 277 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 HOXA1P49639 335 aaPredicted RBP3.91□□□□□ -1.78
LINC00649-220ENST00000628906 RBM11P57052 281 aaKnown RBP3.91□□□□□ -1.78
LINC00649-220ENST00000628906 MPV17LQ2QL34 196 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 C10orf55Q5SWW7 151 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 ZNF322Q6U7Q0 402 aaPredicted RBP3.91□□□□□ -1.78
LINC00649-220ENST00000628906 IDO2Q6ZQW0 420 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 C1orf158Q8N1D5 194 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 ANKRD42Q8N9B4 389 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 OR2T12Q8NG77 320 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 OR10AC1Q8NH08 325 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 OR52N1Q8NH53 320 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 VN1R17PQ8TDU5 208 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 TTTY10Q9BZA0 68 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 STEAP1Q9UHE8 339 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 NEBP20929 6669 aa3.91□□□□□ -1.78
LINC00649-220ENST00000628906 USH2AO75445 5202 aa3.9□□□□□ -1.78
LINC00649-220ENST00000628906 MUC17Q685J3 4493 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 LOC107986453A0A1B0GWG9 222 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 DPPA5A6NC42 116 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 MCRIP1C9JLW8 97 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 FXYD1O00168 92 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 NUPL2O15504 423 aaKnown RBP3.9□□□□□ -1.79
LINC00649-220ENST00000628906 SOCS1O15524 211 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 PSCAO43653 123 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 SC5DO75845 299 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 NXPH4O95158 308 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 PI3P19957 117 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 SLC2A5P22732 501 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 RSU1Q15404 277 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 VMA21Q3ZAQ7 101 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 LINC01620Q4KN68 170 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 SIGIRRQ6IA17 410 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 MMD2Q8IY49 270 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 CADM3Q8N126 398 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 LRTM2Q8N967 370 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 OR10K1Q8NGX5 313 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 DCANP1Q8TF63 244 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 NEDD4LQ96PU5 975 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 KCTD14Q9BQ13 255 aaPredicted RBP3.9□□□□□ -1.79
LINC00649-220ENST00000628906 JAM3Q9BX67 310 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 IL1RAPQ9NPH3 570 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 LGALS13Q9UHV8 139 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 RABAC1Q9UI14 185 aa3.9□□□□□ -1.79
LINC00649-220ENST00000628906 A0A1W2PS18 150 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 ST8SIA3O43173 380 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 CREBL2O60519 120 aaPredicted RBP3.89□□□□□ -1.79
LINC00649-220ENST00000628906 SULT1C4O75897 302 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 GASTP01350 101 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 ISG15P05161 165 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 CTSGP08311 255 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 ZNF735P0CB33 412 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 DEFA4P12838 97 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 AREGP15514 252 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 MGMTP16455 207 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 LINC00310P59036 64 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 CXCR4P61073 352 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 OR5I1Q13606 314 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 FCN2Q15485 313 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 TDRG1Q3Y452 100 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 TPRA1Q86W33 373 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 CMTM1Q8IZ96 169 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 MNS1Q8NEH6 495 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 OR13C9Q8NGT0 318 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 ST8SIA2Q92186 375 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 CCDC28BQ9BUN5 200 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 C11orf54Q9H0W9 315 aaPredicted RBP3.89□□□□□ -1.79
LINC00649-220ENST00000628906 CDIP1Q9H305 208 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 SPACA1Q9HBV2 294 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 ARMC1Q9NVT9 282 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 IL36GQ9NZH8 169 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 THYN1Q9P016 225 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 GOLT1BQ9Y3E0 138 aa3.89□□□□□ -1.79
LINC00649-220ENST00000628906 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
LINC00649-220ENST00000628906 A0A096LPF7 62 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 A0A0J9YY99 117 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 PLAC8L1A1L4L8 177 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 ZNF701M0R085 212 aaPredicted RBP3.88□□□□□ -1.79
LINC00649-220ENST00000628906 RPP14O95059 124 aaKnown RBP3.88□□□□□ -1.79
LINC00649-220ENST00000628906 NPPAP01160 153 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 APOHP02749 345 aaPredicted RBP3.88□□□□□ -1.79
LINC00649-220ENST00000628906 UBCP0CG48 685 aaKnown RBP3.88□□□□□ -1.79
LINC00649-220ENST00000628906 HMGA2P52926 109 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 CDK10Q15131 360 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 YIF1BQ5BJH7 314 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 TMEM244Q5VVB8 128 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 OR4B1Q8NGF8 309 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 OR4C16Q8NGL9 310 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 GLMPQ8WWB7 406 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 PTX4Q96A99 478 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 LGALS12Q96DT0 336 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 LY96Q9Y6Y9 160 aa3.88□□□□□ -1.79
LINC00649-220ENST00000628906 A0A1W2PQL4 384 aaPredicted RBP3.87□□□□□ -1.79
LINC00649-220ENST00000628906 EBAG9O00559 213 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms