RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TRAV3A0A0B4J244 114 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 TRAV41A0A0B4J266 112 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 E7EUB6 86 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 VDAC1P21796 283 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 PSMB8P28062 276 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 BTCP35070 178 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 LPAR6P43657 344 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 GNB1P62873 340 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 C10orf55Q5SWW7 151 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 TRIQKQ629K1 86 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 RNF152Q8N8N0 203 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 LFNGQ8NES3 379 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 OR4X2Q8NGF9 303 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 GRPEL2Q8TAA5 225 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 TMEM230Q96A57 120 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 A0A1B0GW64 132 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 H0Y980 276 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 RPA2P15927 270 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 FAUP35544 74 aaKnown RBP11.19□□□□□ -0.62
CBWD3-217ENST00000621474 TNXAQ16473 311 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 AKIRIN2Q53H80 203 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 ZNF57Q68EA5 555 aaPredicted RBP11.19□□□□□ -0.62
CBWD3-217ENST00000621474 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 ADAD2Q8NCV1 583 aaKnown RBP11.19□□□□□ -0.62
CBWD3-217ENST00000621474 VSTM2AQ8TAG5 236 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
CBWD3-217ENST00000621474 R3HDM4Q96D70 268 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 SEC22AQ96IW7 307 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 GON7Q9BXV9 100 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
CBWD3-217ENST00000621474 C3orf85A0A1B0GTC6 90 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 CGB1A6NKQ9 187 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 TSPAN15O95858 294 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 RPLP1P05386 114 aaKnown RBP11.18□□□□□ -0.62
CBWD3-217ENST00000621474 MYOD1P15172 320 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 S100GP29377 79 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 G6PCP35575 357 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 SLC35B1P78383 322 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 SP6Q3SY56 376 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 C18orf65Q6ZTR6 163 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 MMD2Q8IY49 270 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
CBWD3-217ENST00000621474 A0A1W2PN81 502 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CRYM-AS1A6NIL9 109 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 PLA2G10O15496 165 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CNIH1O95406 144 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 KRASP01116 189 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CHRNA7P36544 502 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CCR6P51684 374 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 FOXE3Q13461 319 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 KIAA0141Q14154 515 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-217ENST00000621474 PRR31Q5SQ13 230 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 UNQ5815/PRO19632Q6UWF5 114 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 NDUFA11Q86Y39 141 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 COMMD1Q8N668 190 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CCDC71LQ8N9Z2 235 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 ABHD5Q8WTS1 349 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CASTOR1Q8WTX7 329 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 GLYATL2Q8WU03 294 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 C14orf166Q9Y224 244 aaKnown RBP11.17□□□□□ -0.62
CBWD3-217ENST00000621474 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 UPK2O00526 184 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 ELANEP08246 267 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 OR9G9P0C7N8 305 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 APELAP0DMC3 54 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 UCP1P25874 307 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 RPL8P62917 257 aaKnown RBP11.17□□□□□ -0.62
CBWD3-217ENST00000621474 SUPT4H1P63272 117 aaKnown RBP11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CADM3Q8N126 398 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 DMBX1Q8NFW5 382 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 OR4A5Q8NH83 315 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 S100ZQ8WXG8 99 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 AIFM2Q9BRQ8 373 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 CCDC32Q9BV29 185 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 NAA60Q9H7X0 242 aa11.17□□□□□ -0.62
CBWD3-217ENST00000621474 TSSC4Q9Y5U2 329 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-217ENST00000621474 MGAM2Q2M2H8 2515 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 LINC00854A0A1B0GVQ3 168 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 DBX1A6NMT0 343 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 TEX22C9J3V5 150 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-217ENST00000621474 IGKV1-5P01602 117 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 FGF2P09038 288 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 P0C879 139 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 CD40LGP29965 261 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 RPL23AP62750 156 aaKnown RBP11.16□□□□□ -0.62
CBWD3-217ENST00000621474 NSUN5P1Q3KNT7 163 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 GALNT14Q96FL9 552 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
CBWD3-217ENST00000621474 FOXA2Q9Y261 457 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-217ENST00000621474 M0QZ24 198 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 CDS2O95674 445 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms