RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 TUSC2O75896 110 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 OR2J3O76001 311 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 DIRAS3O95661 229 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 HLA-DQB1P01920 261 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 AADACP22760 399 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 DTYMKP23919 212 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 TALDO1P37837 337 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 PSMD7P51665 324 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 ODF1Q14990 250 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 CDK10Q15131 360 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 RPEL1Q2QD12 228 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 VMA21Q3ZAQ7 101 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 HACD4Q5VWC8 232 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 KCTD9Q7L273 389 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 SGPP2Q8IWX5 399 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 ZNF645Q8N7E2 425 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 CACNG8Q8WXS5 425 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 PLEKHA3Q9HB20 300 aa8.65□□□□□ -1.02
CPNE3-210ENST00000621245 RBMX2Q9Y388 322 aaKnown RBP8.65□□□□□ -1.02
CPNE3-210ENST00000621245 LCE6AA0A183 80 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 CGB1A6NKQ9 187 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 MPPED1O15442 326 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 FCER2P06734 321 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 IL6RP08887 468 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-210ENST00000621245 RRASP10301 218 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 PSMB9P28065 219 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 SCAND1P57086 179 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 CBX3Q13185 183 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 CD300EQ496F6 205 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-210ENST00000621245 UBE2UQ5VVX9 321 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 SPARTQ8N0X7 666 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 GVQW1Q8N7I0 195 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 OR5H6Q8NGV6 325 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 OSR1Q8TAX0 266 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-210ENST00000621245 SLC25A38Q96DW6 304 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 USMG5Q96IX5 58 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 ADTRPQ96IZ2 230 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 OR51E2Q9H255 320 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 DAPK2Q9UIK4 370 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 OR2W1Q9Y3N9 320 aa8.64□□□□□ -1.03
CPNE3-210ENST00000621245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.63□□□□□ -1.03
CPNE3-210ENST00000621245 METTL21EPA6NDL7 271 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 ZNF785A8K8V0 405 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 NOTOA8MTQ0 251 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 TNFSF12O43508 249 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 OR2A4O95047 310 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 REG1AP05451 166 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 CD7P09564 240 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 AREGP15514 252 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 GABARAPL2P60520 117 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 Q8N402 240 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 TTC9CQ8N5M4 171 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 TCTEX1D2Q8WW35 142 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 TMEM68Q96MH6 324 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 DCUN1D5Q9BTE7 237 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 PALMDQ9NP74 551 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 TAS2R8Q9NYW2 309 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 SIGLEC8Q9NYZ4 499 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 SPATA2Q9UM82 520 aa8.63□□□□□ -1.03
CPNE3-210ENST00000621245 RRP15Q9Y3B9 282 aaKnown RBP8.63□□□□□ -1.03
CPNE3-210ENST00000621245 RBMY1BA6NDE4 496 aaKnown RBP8.62□□□□□ -1.03
CPNE3-210ENST00000621245 RBMY1EA6NEQ0 496 aaKnown RBP8.62□□□□□ -1.03
CPNE3-210ENST00000621245 ERICH4A6NGS2 130 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 FAM223BA6NKX1 122 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 H0Y980 276 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 KBTBD11O94819 623 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 NDUFB8O95169 186 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 RBMY1DP0C7P1 496 aaKnown RBP8.62□□□□□ -1.03
CPNE3-210ENST00000621245 CD81P60033 236 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 MXD1Q05195 221 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 ATP5G2Q06055 141 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 LCN12Q6JVE5 192 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 SFXN4Q6P4A7 337 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 ZNF773Q6PK81 442 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 LINC00322Q6ZN03 302 aaPredicted RBP8.62□□□□□ -1.03
CPNE3-210ENST00000621245 SSX9Q7RTT3 188 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 FAM223AQ8IWN6 122 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 MMD2Q8IY49 270 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 PUSL1Q8N0Z8 303 aaKnown RBP8.62□□□□□ -1.03
CPNE3-210ENST00000621245 DEFB125Q8N687 156 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 SNAPC3Q92966 411 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 ISOC1Q96CN7 298 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 FYTTD1Q96QD9 318 aaKnown RBP8.62□□□□□ -1.03
CPNE3-210ENST00000621245 SPATA25Q9BR10 227 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 RHBDL2Q9NX52 303 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 ANXA10Q9UJ72 324 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 BLOC1S6Q9UL45 172 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 RAB26Q9ULW5 256 aa8.62□□□□□ -1.03
CPNE3-210ENST00000621245 FAT2Q9NYQ8 4349 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 DNAH17Q9UFH2 4485 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 TRAV3A0A0B4J244 114 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 C2orf70A6NJV1 201 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 OR2C1O95371 312 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 GALP22466 123 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 FGF9P31371 208 aaPredicted RBP8.61□□□□□ -1.03
CPNE3-210ENST00000621245 SDC2P34741 201 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 TGFBR1P36897 503 aa8.61□□□□□ -1.03
CPNE3-210ENST00000621245 RPL27AP46776 148 aaKnown RBP8.61□□□□□ -1.03
CPNE3-210ENST00000621245 HSPA13P48723 471 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms