RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 NPBQ8NG41 125 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 RASL11BQ9BPW5 248 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 KIAA1456Q9P272 454 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 TRAV6A0A075B6T7 132 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 F8W036 122 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 FCGR3BO75015 233 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 AP3S2P59780 193 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 OR2B11Q5JQS5 317 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 CMTM1Q8IZ96 169 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 TOMM5Q8N4H5 51 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 C12orf57Q99622 126 aa12.36□□□□□ -0.43
CDCA3-211ENST00000603043 DISC1C4P0D8 188 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 DNASE2O00115 360 aaPredicted RBP12.35□□□□□ -0.43
CDCA3-211ENST00000603043 GPR31O00270 319 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 NDUFA3O95167 84 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 ZNF735P0CB33 412 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 UCP3P55916 312 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 POLR2GP62487 172 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDCA3-211ENST00000603043 CATR1Q13166 79 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 TERB2Q8NHR7 220 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 SCARB1Q8WTV0 552 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 HARBI1Q96MB7 349 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 TSNAXQ99598 290 aaKnown RBP12.35□□□□□ -0.43
CDCA3-211ENST00000603043 SERTAD4Q9NUC0 356 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 PLXNB1O43157 2135 aa12.35□□□□□ -0.43
CDCA3-211ENST00000603043 HAX1O00165 279 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 PRAF2O60831 178 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 NMBP08949 121 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 H2AFB2P0C5Z0 115 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-211ENST00000603043 PROK1P58294 105 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 KLF9Q13886 244 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-211ENST00000603043 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 TMEM177Q53S58 311 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 OR2T35Q8NGX2 323 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 OR51H1Q8NH63 302 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 ST8SIA2Q92186 375 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 RSRP1Q9BUV0 290 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 RRHO14718 337 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 SSNA1O43805 119 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 RLN1P04808 185 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 PGAM2P15259 253 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 FAUP35544 74 aaKnown RBP12.34□□□□□ -0.43
CDCA3-211ENST00000603043 LGALS7P47929 136 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 PLGLAQ15195 96 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 PHLDA2Q53GA4 152 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 C3orf56Q8N813 242 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 OR4S2Q8NH73 311 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 SPATA3Q8NHX4 192 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 OSR1Q8TAX0 266 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-211ENST00000603043 PRRT1Q99946 306 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 FBXL15Q9H469 300 aa12.34□□□□□ -0.43
CDCA3-211ENST00000603043 L7N2F9 121 aa12.33□□□□□ -0.44
CDCA3-211ENST00000603043 PGLYRP1O75594 196 aaPredicted RBP12.33□□□□□ -0.44
CDCA3-211ENST00000603043 SPDEFO95238 335 aa12.33□□□□□ -0.44
CDCA3-211ENST00000603043 H2AFB1P0C5Y9 115 aa12.33□□□□□ -0.44
CDCA3-211ENST00000603043 S100GP29377 79 aa12.33□□□□□ -0.44
CDCA3-211ENST00000603043 KIR2DS2P43631 304 aa12.33□□□□□ -0.44
CDCA3-211ENST00000603043 PSG5Q15238 335 aa12.33□□□□□ -0.44
CDCA3-211ENST00000603043 WFDC12Q8WWY7 111 aa12.33□□□□□ -0.44
CDCA3-211ENST00000603043 METTL1Q9UBP6 276 aaKnown RBP12.33□□□□□ -0.44
CDCA3-211ENST00000603043 SLC25A17O43808 307 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 IGLV2-23P01705 113 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 IGHG2P01859 326 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 BRWD1-AS2P59051 145 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 SLC35E3Q7Z769 313 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 SPAG16Q8N0X2 631 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 CXorf58Q96LI9 332 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 HSPB9Q9BQS6 159 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 G3V3Q6 166 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 HLA-DRB1P01911 266 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 VSIG10L2P0DP72 767 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 ECI1P42126 302 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 FGL1Q08830 312 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 KLHDC1Q8N7A1 406 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 MARCH1Q8TCQ1 289 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 MRGPRFQ96AM1 343 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 SLC2A9Q9NRM0 540 aa12.32□□□□□ -0.44
CDCA3-211ENST00000603043 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
CDCA3-211ENST00000603043 RAMP3O60896 148 aa12.31□□□□□ -0.44
CDCA3-211ENST00000603043 S100A6P06703 90 aa12.31□□□□□ -0.44
CDCA3-211ENST00000603043 PI3P19957 117 aa12.31□□□□□ -0.44
CDCA3-211ENST00000603043 STPG2Q8N412 459 aa12.31□□□□□ -0.44
CDCA3-211ENST00000603043 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
CDCA3-211ENST00000603043 HRASLSQ9HDD0 168 aa12.31□□□□□ -0.44
CDCA3-211ENST00000603043 TNCP24821 2201 aa12.31□□□□□ -0.44
CDCA3-211ENST00000603043 NUPL2O15504 423 aaKnown RBP12.3□□□□□ -0.44
CDCA3-211ENST00000603043 RBFOX2O43251 390 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDCA3-211ENST00000603043 KCNAB3O43448 404 aa12.3□□□□□ -0.44
CDCA3-211ENST00000603043 GIPP09681 153 aaPredicted RBP12.3□□□□□ -0.44
CDCA3-211ENST00000603043 AKR1D1P51857 326 aa12.3□□□□□ -0.44
CDCA3-211ENST00000603043 SURF2Q15527 256 aaPredicted RBP12.3□□□□□ -0.44
CDCA3-211ENST00000603043 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
CDCA3-211ENST00000603043 TBC1D26Q86UD7 250 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms