RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 VDAC1P21796 283 aa12.96□□□□□ -0.33
PPFIA3-206ENST00000602655 HOXC12P31275 282 aa12.96□□□□□ -0.33
PPFIA3-206ENST00000602655 SELENOHQ8IZQ5 122 aaKnown RBP12.96□□□□□ -0.33
PPFIA3-206ENST00000602655 FAM89BQ8N5H3 189 aa12.96□□□□□ -0.33
PPFIA3-206ENST00000602655 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.33
PPFIA3-206ENST00000602655 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.33
PPFIA3-206ENST00000602655 PCSK5Q92824 1860 aa12.96□□□□□ -0.33
PPFIA3-206ENST00000602655 NDUFS8O00217 210 aa12.96□□□□□ -0.34
PPFIA3-206ENST00000602655 AGFG2O95081 481 aa12.96□□□□□ -0.34
PPFIA3-206ENST00000602655 LRTM2Q8N967 370 aa12.96□□□□□ -0.34
PPFIA3-206ENST00000602655 KCNE4Q8WWG9 221 aa12.96□□□□□ -0.34
PPFIA3-206ENST00000602655 GFRA3O60609 400 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 TMEM178AQ8NBL3 297 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 ELOVL5Q9NYP7 299 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 SPRR3Q9UBC9 169 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 TNRC6BQ9UPQ9 1833 aaKnown RBP12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 RBMXL2O75526 392 aaKnown RBP12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 NAPSAO96009 420 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 GPX1P07203 203 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 OR56B2PQ8NGI1 322 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 OR10G8Q8NGN5 311 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 TP73-AS1Q9UF72 201 aa12.95□□□□□ -0.34
PPFIA3-206ENST00000602655 IGLV3-32A0A0A0MS00 114 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 SLC22A20A6NK97 555 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 NGFP01138 241 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 C3orf79P0CE67 100 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 LHX2P50458 406 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 PSG4Q00888 419 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 PIGYQ3MUY2 71 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 RPRMLQ8N4K4 120 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 SH2D2AQ9NP31 389 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 TP53TG3Q9ULZ0 132 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 LOC102725191A0A1B0GVB3 256 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 TMEM238LA0A1B0GVL6 79 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 OR5B21A6NL26 309 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 CLDN1O95832 211 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 OTX1P32242 354 aaPredicted RBP12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 HOXA4Q00056 320 aaPredicted RBP12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 SMIM21Q3B7S5 101 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 SLC25A53Q5H9E4 307 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 GNB4Q9HAV0 340 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 MYO18BQ8IUG5 2567 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 MED12LQ86YW9 2145 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 YLPM1P49750 1951 aaKnown RBP12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 ZNF716A6NP11 495 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 MGST1P10620 155 aaKnown RBP12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 ALKBH6Q3KRA9 238 aa12.94□□□□□ -0.34
PPFIA3-206ENST00000602655 H0Y8G0 127 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 TCL1AP56279 114 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 CLDN18P56856 261 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 SERF2P84101 59 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 SFRP2Q96HF1 295 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 CCL28Q9NRJ3 127 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 CACNG5Q9UF02 275 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 CORTO00230 105 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 ID3Q02535 119 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 ARL16Q0P5N6 197 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 SAMD13Q5VXD3 122 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 PLCXD3Q63HM9 321 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 LHFPL4Q7Z7J7 247 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 IGHV1-69-2A0A0G2JMI3 117 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 M0R1X1 148 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 MALLQ13021 153 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 ZDHHC23Q8IYP9 409 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 AGMATQ9BSE5 352 aa12.93□□□□□ -0.34
PPFIA3-206ENST00000602655 LRP5LA4QPB2 252 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 FUT6P51993 359 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 ODF3L1Q8IXM7 274 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 GPR146Q96CH1 333 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 ZNF503-AS2A6NEH8 195 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 GAGE10A6NGK3 116 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 FAM87AP0C7U9 286 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 COMPP49747 757 aaPredicted RBP12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 MMP23AO75900 390 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 IGKV1D-33P01593 117 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 IGKV1-33P01594 117 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 APOA2P02652 100 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 PRRX1P54821 245 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 ZNF114Q8NC26 417 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 OR1N2Q8NGR9 330 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 TAF15Q92804 592 aaKnown RBP eCLIP12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 SPTSSAQ969W0 71 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 TMEM186Q96B77 213 aa12.92□□□□□ -0.34
PPFIA3-206ENST00000602655 HSBP1O75506 76 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 ATP5G3P48201 142 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 PAX9P55771 341 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 SLC38A11Q08AI6 406 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 GABRA6Q16445 453 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 KRTCAP3Q53RY4 240 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 CXorf67Q86X51 503 aaPredicted RBP12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 UBALD1Q8TB05 177 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 CPT1CQ8TCG5 803 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 CPAMD8Q8IZJ3 1885 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 SYNGR2O43760 224 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 ZNF17P17021 662 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 FABP6P51161 128 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 RPL24P83731 157 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms