RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MDKP21741 143 aaPredicted RBP14.87□□□□□ -0.03
CCDC9-205ENST00000600117 SSBP2P81877 361 aaPredicted RBP14.87□□□□□ -0.03
CCDC9-205ENST00000600117 NDPQ00604 133 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 TMEM187Q14656 261 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 PLGLAQ15195 96 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 TMEM128Q5BJH2 165 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 OR4A47Q6IF82 309 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 SSX9Q7RTT3 188 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 PPP1R27Q86WC6 154 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 LHFPL5Q8TAF8 219 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 TMEM167AQ8TBQ9 72 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 SEC22AQ96IW7 307 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 CLCC1Q96S66 551 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 PALMDQ9NP74 551 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 BET1LQ9NYM9 111 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 MMP24Q9Y5R2 645 aa14.87□□□□□ -0.03
CCDC9-205ENST00000600117 MARCH11A6NNE9 402 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 OR2A4O95047 310 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 CDS2O95674 445 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 CA2P00918 260 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 UBE2MP61081 183 aaKnown RBP14.86□□□□□ -0.03
CCDC9-205ENST00000600117 CX3CL1P78423 397 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 PPP1R1AQ13522 171 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 PRSS8Q16651 343 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 NRARPQ7Z6K4 114 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 SLC35E3Q7Z769 313 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 CADM3Q8N126 398 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 OR2T6Q8NHC8 308 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 OR2A7Q96R45 310 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 AIFM2Q9BRQ8 373 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 NUDT15Q9NV35 164 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 KCNIP3Q9Y2W7 256 aa14.86□□□□□ -0.03
CCDC9-205ENST00000600117 CLPSL1A2RUU4 121 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 KBTBD11O94819 623 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 KRASP01116 189 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 ANXA7P20073 488 aaKnown RBP14.85□□□□□ -0.03
CCDC9-205ENST00000600117 G6PCP35575 357 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 TRIM16LQ309B1 348 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 DUSP18Q8NEJ0 188 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 VSTM2AQ8TAG5 236 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 ENKURQ8TC29 256 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 TMEM56Q96MV1 263 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 ALX4Q9H161 411 aaPredicted RBP14.85□□□□□ -0.03
CCDC9-205ENST00000600117 OR51J1Q9H342 316 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 ZNF430Q9H8G1 570 aaPredicted RBP14.85□□□□□ -0.03
CCDC9-205ENST00000600117 BEX1Q9HBH7 125 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 TMEM140Q9NV12 185 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 PRR13Q9NZ81 148 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 NUBP2Q9Y5Y2 271 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 TMEM56-RWDD3S4R434 201 aa14.85□□□□□ -0.03
CCDC9-205ENST00000600117 TRAV6A0A075B6T7 132 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 TRAV3A0A0B4J244 114 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 UPK2O00526 184 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 SFT2D2O95562 160 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 IGKV1-5P01602 117 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 P0C879 139 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 VDAC2P45880 294 aaPredicted RBP14.84□□□□□ -0.03
CCDC9-205ENST00000600117 MECP2P51608 486 aaKnown RBP14.84□□□□□ -0.03
CCDC9-205ENST00000600117 ERVK-16P61578 105 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 ZNF562Q6V9R5 426 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 SELENOHQ8IZQ5 122 aaKnown RBP14.84□□□□□ -0.03
CCDC9-205ENST00000600117 DMBX1Q8NFW5 382 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 OR4A5Q8NH83 315 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 WNT10AQ9GZT5 417 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 FBXO7Q9Y3I1 522 aa14.84□□□□□ -0.03
CCDC9-205ENST00000600117 A0A1B0GUS0 222 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 H2AFB2P0C5Z0 115 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 OR4E1P0C645 316 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 EGR2P11161 476 aaPredicted RBP14.83□□□□□ -0.04
CCDC9-205ENST00000600117 VAMP1P23763 118 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 PROK1P58294 105 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 DCTN2Q13561 401 aaKnown RBP14.83□□□□□ -0.04
CCDC9-205ENST00000600117 ANKRD55Q3KP44 614 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 ARSJQ5FYB0 599 aaPredicted RBP14.83□□□□□ -0.04
CCDC9-205ENST00000600117 MMD2Q8IY49 270 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 IL22RA2Q969J5 263 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 RNF114Q9Y508 228 aa14.83□□□□□ -0.04
CCDC9-205ENST00000600117 A0A0G2JRQ6 117 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 C9orf170A2RU37 121 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 ATP6V0E1O15342 81 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 IGF1P05019 195 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 OR9G9P0C7N8 305 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 ANXA3P12429 323 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 SPNP16150 400 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 FXYD3Q14802 87 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 RBPMSQ93062 196 aaKnown RBP14.82□□□□□ -0.04
CCDC9-205ENST00000600117 NOL4LQ96MY1 436 aaPredicted RBP14.82□□□□□ -0.04
CCDC9-205ENST00000600117 PARP11Q9NR21 331 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 ZNF580Q9UK33 172 aa14.82□□□□□ -0.04
CCDC9-205ENST00000600117 AP4M1O00189 453 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 CREBL2O60519 120 aaPredicted RBP14.81□□□□□ -0.04
CCDC9-205ENST00000600117 CRIP2P52943 208 aaPredicted RBP14.81□□□□□ -0.04
CCDC9-205ENST00000600117 GNB1P62873 340 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 RPL8P62917 257 aaKnown RBP14.81□□□□□ -0.04
CCDC9-205ENST00000600117 DHRS2Q13268 280 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 TNXAQ16473 311 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 IZUMO4Q1ZYL8 232 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 TMEM268Q5VZI3 342 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 LYG2Q86SG7 212 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 FOXRED2Q8IWF2 684 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms