RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 DEFA5Q01523 94 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 DYRK1AQ13627 763 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 SAMD12Q8N8I0 201 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 LFNGQ8NES3 379 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 BEST4Q8NFU0 473 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 PHB2Q99623 299 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 MRPS7Q9Y2R9 242 aaKnown RBP11.64□□□□□ -0.55
LIG1-214ENST00000597146 HERC1Q15751 4861 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 CRYZL1O95825 349 aa11.63□□□□□ -0.55
LIG1-214ENST00000597146 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
LIG1-214ENST00000597146 AKIRIN2Q53H80 203 aa11.63□□□□□ -0.55
LIG1-214ENST00000597146 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
LIG1-214ENST00000597146 SLA2Q9H6Q3 261 aa11.63□□□□□ -0.55
LIG1-214ENST00000597146 AUNIPQ9H7T9 357 aa11.63□□□□□ -0.55
LIG1-214ENST00000597146 SLC2A8Q9NY64 477 aa11.63□□□□□ -0.55
LIG1-214ENST00000597146 MPPED1O15442 326 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 XRCC3O43542 346 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 SSX5O60225 188 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 FCGR3BO75015 233 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 TRBV12-3P01733 135 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 FCGR2CP31995 323 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 TGFBR1P36897 503 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 UBE2NLQ5JXB2 153 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 TMEM69Q5SWH9 247 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 LYG2Q86SG7 212 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 OR5T1Q8NG75 326 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 KCTD12Q96CX2 325 aaKnown RBP11.62□□□□□ -0.55
LIG1-214ENST00000597146 SLC25A38Q96DW6 304 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 FUNDC2Q9BWH2 189 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 COMMD3Q9UBI1 195 aa11.62□□□□□ -0.55
LIG1-214ENST00000597146 HSPG2P98160 4391 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 C13orf42A0A1B0GVH6 325 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 ZNF785A8K8V0 405 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
LIG1-214ENST00000597146 MECP2P51608 486 aaKnown RBP11.61□□□□□ -0.55
LIG1-214ENST00000597146 TMEM177Q53S58 311 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 OR2B11Q5JQS5 317 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 KCTD9Q7L273 389 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 HOGA1Q86XE5 327 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 GVQW1Q8N7I0 195 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 TEX45Q8NA69 505 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 OSR1Q8TAX0 266 aaPredicted RBP11.61□□□□□ -0.55
LIG1-214ENST00000597146 SECTM1Q8WVN6 248 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 TCTEX1D2Q8WW35 142 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 ACOT12Q8WYK0 555 aa11.61□□□□□ -0.55
LIG1-214ENST00000597146 HSD17B10Q99714 261 aaKnown RBP11.61□□□□□ -0.55
LIG1-214ENST00000597146 RBMX2Q9Y388 322 aaKnown RBP11.61□□□□□ -0.55
LIG1-214ENST00000597146 A0A1B0GVY2 172 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 MEIS3P1A6NDR6 274 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 CREBL2O60519 120 aaPredicted RBP11.6□□□□□ -0.55
LIG1-214ENST00000597146 RORCP51449 518 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 HERV-K104P61576 105 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 VBP1P61758 197 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 PJVKQ0ZLH3 352 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 TNXAQ16473 311 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 MZT2AQ6P582 158 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 LAX1Q8IWV1 398 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 OR2K2Q8NGT1 345 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 TMEM68Q96MH6 324 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 SLC5A7Q9GZV3 580 aa11.6□□□□□ -0.55
LIG1-214ENST00000597146 MSGN1A6NI15 193 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 LINC00473A8K010 186 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 PTHLHP12272 177 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 AADACP22760 399 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 PRSS3P35030 304 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 FXYD4P59646 89 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 UBE2KP61086 200 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 NCS1P62166 190 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 GUCA2BQ16661 112 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 MFSD4AQ8N468 514 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
LIG1-214ENST00000597146 SLC25A46Q96AG3 418 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 AIFM2Q9BRQ8 373 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 COA4Q9NYJ1 87 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 TAS2R8Q9NYW2 309 aa11.59□□□□□ -0.55
LIG1-214ENST00000597146 A0A0G2JLM5 398 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 FAM25AB3EWG3 89 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 FAM25CB3EWG5 89 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 FAM25GB3EWG6 89 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 IGLV2-23P01705 113 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 CDK10Q15131 360 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 ZNF66Q6ZN08 573 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 POC5Q8NA72 575 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 OR5AP2Q8NGF4 316 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 OR13F1Q8NGS4 319 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 OR4S2Q8NH73 311 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 BORCS5Q969J3 196 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 C5orf30Q96GV9 206 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 CCL28Q9NRJ3 127 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 SELENOKQ9Y6D0 94 aa11.58□□□□□ -0.56
LIG1-214ENST00000597146 IGKV1D-13A0A0B4J2D9 117 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 DPPA5A6NC42 116 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 SRRM4A7MD48 611 aaKnown RBP11.57□□□□□ -0.56
LIG1-214ENST00000597146 TNFSF12O43508 249 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 HRASP01112 189 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 PPYP01298 95 aa11.57□□□□□ -0.56
LIG1-214ENST00000597146 APELAP0DMC3 54 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms