RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ACTL6BO94805 426 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 KBTBD11O94819 623 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 IGHG4P01861 327 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
LIG1-208ENST00000595758 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
LIG1-208ENST00000595758 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
LIG1-208ENST00000595758 FOXE3Q13461 319 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 TNXAQ16473 311 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 C2orf68Q2NKX9 166 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 NSUN5P1Q3KNT7 163 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 OR4A47Q6IF82 309 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 LFNGQ8NES3 379 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 TMEM167AQ8TBQ9 72 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 SCGB3A2Q96PL1 93 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 RTBDNQ9BSG5 229 aaPredicted RBP11.26□□□□□ -0.61
LIG1-208ENST00000595758 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 GPR132Q9UNW8 380 aa11.26□□□□□ -0.61
LIG1-208ENST00000595758 TSSC4Q9Y5U2 329 aaPredicted RBP11.26□□□□□ -0.61
LIG1-208ENST00000595758 TET2Q6N021 2002 aaPredicted RBP11.25□□□□□ -0.61
LIG1-208ENST00000595758 A0A1W2PRX2 142 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 SERPINE2P07093 398 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 ELANEP08246 267 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 ERVK-16P61578 105 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 AKIRIN2Q53H80 203 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 C19orf54Q5BKX5 351 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 CXorf66Q5JRM2 361 aaPredicted RBP11.25□□□□□ -0.61
LIG1-208ENST00000595758 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 DMBX1Q8NFW5 382 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 OR4A5Q8NH83 315 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 S100ZQ8WXG8 99 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 C5orf66Q9H5L9 145 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 BET1LQ9NYM9 111 aa11.25□□□□□ -0.61
LIG1-208ENST00000595758 TEX13DA0A0J9YY54 714 aaPredicted RBP11.24□□□□□ -0.61
LIG1-208ENST00000595758 C3orf85A0A1B0GTC6 90 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 MSGN1A6NI15 193 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 ADARB2-AS1A8MUL3 147 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 H0Y980 276 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 KRASP01116 189 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 IL7P13232 177 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 RPA2P15927 270 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 MAS1LP35410 378 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 RPL8P62917 257 aaKnown RBP11.24□□□□□ -0.61
LIG1-208ENST00000595758 TMEM65Q6PI78 240 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
LIG1-208ENST00000595758 ZFP57Q9NU63 452 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 TMEM140Q9NV12 185 aa11.24□□□□□ -0.61
LIG1-208ENST00000595758 FOXA2Q9Y261 457 aaPredicted RBP11.24□□□□□ -0.61
LIG1-208ENST00000595758 WNK1Q9H4A3 2382 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 A0A1W2PN81 502 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 NAP1L6A6NFF2 107 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 MARCH11A6NNE9 402 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 UPK2O00526 184 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 B3GALNT1O75752 331 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 RPLP1P05386 114 aaKnown RBP11.23□□□□□ -0.61
LIG1-208ENST00000595758 IL6RP08887 468 aaPredicted RBP11.23□□□□□ -0.61
LIG1-208ENST00000595758 PF4V1P10720 104 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 HLA-GP17693 338 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 PSMB8P28062 276 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 G6PCP35575 357 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 CHRNA7P36544 502 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 SP6Q3SY56 376 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 LCNL1Q6ZST4 164 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 RNF152Q8N8N0 203 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 TMEM68Q96MH6 324 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 TP53RKQ96S44 253 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 PHB2Q99623 299 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 NAA60Q9H7X0 242 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 VSIG4Q9Y279 399 aa11.23□□□□□ -0.61
LIG1-208ENST00000595758 TRAV3A0A0B4J244 114 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 CENPXA8MT69 81 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 SOX15O60248 233 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 TSPAN15O95858 294 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 CD40LGP29965 261 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 RPL27AP46776 148 aaKnown RBP11.22□□□□□ -0.61
LIG1-208ENST00000595758 RPL23AP62750 156 aaKnown RBP11.22□□□□□ -0.61
LIG1-208ENST00000595758 C10orf55Q5SWW7 151 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 CADM3Q8N126 398 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 OR5T1Q8NG75 326 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 OR5M8Q8NGP6 311 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 SPIN2AQ99865 258 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 SPIN2BQ9BPZ2 258 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 SLC25A21Q9BQT8 299 aaPredicted RBP11.22□□□□□ -0.61
LIG1-208ENST00000595758 CCDC32Q9BV29 185 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
LIG1-208ENST00000595758 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 SNAPC5O75971 98 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 ATG12O94817 140 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 APELAP0DMC3 54 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 UCP1P25874 307 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 RAB9AP51151 201 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms