RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ZNF562Q6V9R5 426 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 SLC35E3Q7Z769 313 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 CADM3Q8N126 398 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 DMBX1Q8NFW5 382 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 TMEM167AQ8TBQ9 72 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 TMEM56Q96MV1 263 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 ZNF430Q9H8G1 570 aaPredicted RBP17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 TMEM140Q9NV12 185 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 NUBP2Q9Y5Y2 271 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 TMEM56-RWDD3S4R434 201 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 COL6A5A8TX70 2615 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 OR4E1P0C645 316 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 VAMP1P23763 118 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 MECP2P51608 486 aaKnown RBP17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 NDPQ00604 133 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 MMP24Q9Y5R2 645 aa17.8■□□□□ 0.44
SNRNP70-204ENST00000595231 TRAV3A0A0B4J244 114 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 CLPSL1A2RUU4 121 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 SFT2D2O95562 160 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 IGKV1-5P01602 117 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 H2AFB2P0C5Z0 115 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 FOXL1Q12952 345 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 DCTN2Q13561 401 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 SELENOHQ8IZQ5 122 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 OR51J1Q9H342 316 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 BEX1Q9HBH7 125 aa17.79■□□□□ 0.44
SNRNP70-204ENST00000595231 C9orf170A2RU37 121 aa17.78■□□□□ 0.44
SNRNP70-204ENST00000595231 ERVK-16P61578 105 aa17.78■□□□□ 0.44
SNRNP70-204ENST00000595231 OR4A5Q8NH83 315 aa17.78■□□□□ 0.44
SNRNP70-204ENST00000595231 RBPMSQ93062 196 aaKnown RBP17.78■□□□□ 0.44
SNRNP70-204ENST00000595231 FBXO7Q9Y3I1 522 aa17.78■□□□□ 0.44
SNRNP70-204ENST00000595231 UPK2O00526 184 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 KCNAB3O43448 404 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 P0C879 139 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 EGR2P11161 476 aaPredicted RBP17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 ANXA3P12429 323 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 VDAC2P45880 294 aaPredicted RBP17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 ANKRD55Q3KP44 614 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 ARSJQ5FYB0 599 aaPredicted RBP17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 NOL4LQ96MY1 436 aaPredicted RBP17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 MDFIQ99750 246 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 WNT10AQ9GZT5 417 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 RNF114Q9Y508 228 aa17.77■□□□□ 0.44
SNRNP70-204ENST00000595231 IGF1P05019 195 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 OR9G9P0C7N8 305 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 RAB25P57735 213 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 PROK1P58294 105 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 DHRS2Q13268 280 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 TMEM268Q5VZI3 342 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 ZNF695Q8IW36 515 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 MMD2Q8IY49 270 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 IL22RA2Q969J5 263 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 LINC00527Q9UJ94 153 aa17.77■□□□□ 0.43
SNRNP70-204ENST00000595231 TENM1Q9UKZ4 2725 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 A0A1B0GUS0 222 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 ATP6V0E1O15342 81 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 HLA-AP01891 365 aaKnown RBP17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 SPNP16150 400 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 COMPP49747 757 aaPredicted RBP17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 GNB1P62873 340 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 FXYD3Q14802 87 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 C4orf46Q504U0 113 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 AWAT1Q58HT5 328 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 LYG2Q86SG7 212 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 CASTOR1Q8WTX7 329 aa17.76■□□□□ 0.43
SNRNP70-204ENST00000595231 A0A0G2JRQ6 117 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 AP4M1O00189 453 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 RPL8P62917 257 aaKnown RBP17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 TNXAQ16473 311 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 IZUMO4Q1ZYL8 232 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 KRTAP21-3Q3LHN1 58 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 PLET1Q6UQ28 207 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 H2BFWTQ7Z2G1 175 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 FOXRED2Q8IWF2 684 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 SLC35G3Q8N808 338 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 LRTM2Q8N967 370 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 MARVELD1Q9BSK0 173 aa17.75■□□□□ 0.43
SNRNP70-204ENST00000595231 CREBL2O60519 120 aaPredicted RBP17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 ATG12O94817 140 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 FGF2P09038 288 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 MYOD1P15172 320 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 AKR1C2P52895 323 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 LGI3Q8N145 548 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 OR52B4Q8NGK2 314 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 ARPC1AQ92747 370 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 FAM103A1Q9BTL3 118 aaKnown RBP17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 PARP11Q9NR21 331 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 ZNF580Q9UK33 172 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 NSG2Q9Y328 171 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 E7EUB6 86 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 CNIH1O95406 144 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 DUS4LO95620 317 aaKnown RBP17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 PTTG1O95997 202 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 HLA-GP17693 338 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 SRPXP78539 464 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 C10orf55Q5SWW7 151 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 LYZL2Q7Z4W2 148 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 STPG2Q8N412 459 aa17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 WIPF2Q8TF74 440 aaPredicted RBP17.74■□□□□ 0.43
SNRNP70-204ENST00000595231 A0A0B4J2A0 478 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms