RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 C19orf54Q5BKX5 351 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 KHDC1LQ5JSQ8 128 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 C10orf55Q5SWW7 151 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 LCNL1Q6ZST4 164 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 CCDC71LQ8N9Z2 235 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 LFNGQ8NES3 379 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 DMBX1Q8NFW5 382 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 SGMS2Q8NHU3 365 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 TMEM167AQ8TBQ9 72 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 VSIG4Q9Y279 399 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 NUBP2Q9Y5Y2 271 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 TNCP24821 2201 aa17.94■□□□□ 0.46
PNKP-205ENST00000595081 TET2Q6N021 2002 aaPredicted RBP17.93■□□□□ 0.46
PNKP-205ENST00000595081 ADARB2-AS1A8MUL3 147 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 POU2AF1Q16633 256 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 TEX38Q6PEX7 206 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 MMD2Q8IY49 270 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 DEDD2Q8WXF8 326 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 TP53RKQ96S44 253 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 AIFM2Q9BRQ8 373 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 TMEM140Q9NV12 185 aa17.93■□□□□ 0.46
PNKP-205ENST00000595081 TRAV3A0A0B4J244 114 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 C3orf85A0A1B0GTC6 90 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 MARCH11A6NNE9 402 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 H0Y980 276 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 CREBL2O60519 120 aaPredicted RBP17.92■□□□□ 0.46
PNKP-205ENST00000595081 ACTL6BO94805 426 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 KRASP01116 189 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 IGHG4P01861 327 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 G6PCP35575 357 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 ERVK-16P61578 105 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 SP6Q3SY56 376 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 UNQ5815/PRO19632Q6UWF5 114 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 NDUFA11Q86Y39 141 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 COMMD1Q8N668 190 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 MINDY2Q8NBR6 621 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 FAM212BQ9NTI7 297 aaPredicted RBP17.92■□□□□ 0.46
PNKP-205ENST00000595081 BET1LQ9NYM9 111 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 VWFP04275 2813 aa17.92■□□□□ 0.46
PNKP-205ENST00000595081 A0A1W2PN81 502 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 M0QZ24 198 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 SOX15O60248 233 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 TSPAN15O95858 294 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 IGKV1-39P01597 117 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 IGKV1D-39P04432 117 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 SERPINE2P07093 398 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 APELAP0DMC3 54 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 MYOD1P15172 320 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 CHRNA7P36544 502 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 TMEM267Q0VDI3 215 aaPredicted RBP17.91■□□□□ 0.46
PNKP-205ENST00000595081 FOXE3Q13461 319 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 ADAD2Q8NCV1 583 aaKnown RBP17.91■□□□□ 0.46
PNKP-205ENST00000595081 SRSF12Q8WXF0 261 aaKnown RBP17.91■□□□□ 0.46
PNKP-205ENST00000595081 S100ZQ8WXG8 99 aa17.91■□□□□ 0.46
PNKP-205ENST00000595081 FOXA2Q9Y261 457 aaPredicted RBP17.91■□□□□ 0.46
PNKP-205ENST00000595081 TSSC4Q9Y5U2 329 aaPredicted RBP17.91■□□□□ 0.46
PNKP-205ENST00000595081 TEX13DA0A0J9YY54 714 aaPredicted RBP17.9■□□□□ 0.46
PNKP-205ENST00000595081 MSGN1A6NI15 193 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 OPN1MWP04001 364 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 RPLP1P05386 114 aaKnown RBP17.9■□□□□ 0.46
PNKP-205ENST00000595081 OPN1MW2P0DN77 364 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 OPN1MW3P0DN78 364 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 C2orf68Q2NKX9 166 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 AKIRIN2Q53H80 203 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 ASPHD1Q5U4P2 390 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 OR4A5Q8NH83 315 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 CASTOR1Q8WTX7 329 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 SCGB3A2Q96PL1 93 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 KLK15Q9H2R5 256 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 NAA60Q9H7X0 242 aa17.9■□□□□ 0.46
PNKP-205ENST00000595081 UPK2O00526 184 aa17.89■□□□□ 0.45
PNKP-205ENST00000595081 IGLV1-40P01703 118 aa17.89■□□□□ 0.45
PNKP-205ENST00000595081 ELANEP08246 267 aa17.89■□□□□ 0.45
PNKP-205ENST00000595081 IL6RP08887 468 aaPredicted RBP17.89■□□□□ 0.45
PNKP-205ENST00000595081 PSMB8P28062 276 aa17.89■□□□□ 0.45
PNKP-205ENST00000595081 CCR6P51684 374 aa17.89■□□□□ 0.45
PNKP-205ENST00000595081 RPL8P62917 257 aaKnown RBP17.89■□□□□ 0.45
PNKP-205ENST00000595081 CXorf66Q5JRM2 361 aaPredicted RBP17.89■□□□□ 0.45
PNKP-205ENST00000595081 TMEM230Q96A57 120 aa17.89■□□□□ 0.45
PNKP-205ENST00000595081 PHB2Q99623 299 aa17.89■□□□□ 0.45
PNKP-205ENST00000595081 CRYM-AS1A6NIL9 109 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 OR5AC1P0C628 307 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 PF4V1P10720 104 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 HLA-GP17693 338 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 RPL23AP62750 156 aaKnown RBP17.88■□□□□ 0.45
PNKP-205ENST00000595081 C18orf65Q6ZTR6 163 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 RNF152Q8N8N0 203 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 OR5T1Q8NG75 326 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 SEC22AQ96IW7 307 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 CCDC32Q9BV29 185 aa17.88■□□□□ 0.45
PNKP-205ENST00000595081 NAP1L6A6NFF2 107 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 E7EUB6 86 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 UCP1P25874 307 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 MAS1LP35410 378 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 RPL27AP46776 148 aaKnown RBP17.87■□□□□ 0.45
PNKP-205ENST00000595081 TRIM16LQ309B1 348 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 TMED4Q7Z7H5 227 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 NSG2Q9Y328 171 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 PKD1L1Q8TDX9 2849 aa17.87■□□□□ 0.45
PNKP-205ENST00000595081 WNK1Q9H4A3 2382 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms