RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 C8orf86Q6ZUL3 223 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 TCTEX1D1Q8N7M0 179 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 TERB2Q8NHR7 220 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 GRPEL2Q8TAA5 225 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 TMEM167AQ8TBQ9 72 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 CASTOR1Q8WTX7 329 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 DEDD2Q8WXF8 326 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 RHOVQ96L33 236 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 PALMDQ9NP74 551 aa11.92□□□□□ -0.5
TRIM47-206ENST00000592942 FOXA2Q9Y261 457 aaPredicted RBP11.92□□□□□ -0.5
TRIM47-206ENST00000592942 ANKRD20A5PA0PJZ0 165 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 MSGN1A6NI15 193 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 OR2A4O95047 310 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 HPRT1P00492 218 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 HRASP01112 189 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 RLN1P04808 185 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 IFNA6P05013 189 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 F2RP25116 425 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 AP3S2P59780 193 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 GNB1P62873 340 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 PHLDA2Q53GA4 152 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 FAAP20Q6NZ36 180 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 ZNF695Q8IW36 515 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 SLC38A6Q8IZM9 456 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 OR2A7Q96R45 310 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
TRIM47-206ENST00000592942 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 A0A1B0GW64 132 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 KBTBD11O94819 623 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 S1PR2O95136 353 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 PF4V1P10720 104 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 LPAR6P43657 344 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 INPP1P49441 399 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 TAS2R31P59538 309 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 IFITM3Q01628 133 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 KLF9Q13886 244 aaPredicted RBP11.9□□□□□ -0.5
TRIM47-206ENST00000592942 TNXAQ16473 311 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 C10orf55Q5SWW7 151 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 SSX9Q7RTT3 188 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 TBC1D26Q86UD7 250 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 MMD2Q8IY49 270 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 TOMM5Q8N4H5 51 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 KLHL30-AS1Q8NEE0 82 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 OR5T1Q8NG75 326 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 OR4C16Q8NGL9 310 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 OR5M8Q8NGP6 311 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 CD300LFQ8TDQ1 290 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 RAX2Q96IS3 184 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 UBE2E2Q96LR5 201 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 P2RX4Q99571 388 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 C7orf50Q9BRJ6 194 aaKnown RBP11.9□□□□□ -0.5
TRIM47-206ENST00000592942 GNB4Q9HAV0 340 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 BET1LQ9NYM9 111 aa11.9□□□□□ -0.5
TRIM47-206ENST00000592942 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 I3L521 148 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 AKAIN1P0CW23 69 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 MYOD1P15172 320 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 PI3P19957 117 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 SLC6A1P30531 599 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 RND3P61587 244 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
TRIM47-206ENST00000592942 ZNF57Q68EA5 555 aaPredicted RBP11.89□□□□□ -0.51
TRIM47-206ENST00000592942 OR4A47Q6IF82 309 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 TMEM65Q6PI78 240 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 MRPL41Q8IXM3 137 aaKnown RBP11.89□□□□□ -0.51
TRIM47-206ENST00000592942 LINC00482Q8N8I6 264 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 OR13C8Q8NGS7 320 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
TRIM47-206ENST00000592942 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 DUX3Q96PT4 197 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
TRIM47-206ENST00000592942 TEX22C9J3V5 150 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 UPK2O00526 184 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 MPPED1O15442 326 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 RBMXL2O75526 392 aaKnown RBP11.88□□□□□ -0.51
TRIM47-206ENST00000592942 BRI3O95415 125 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 IGKV1-39P01597 117 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 IGKV1D-39P04432 117 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 APELAP0DMC3 54 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 NQO2P16083 231 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 MYCNOSP40205 109 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 MEF2DQ14814 521 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 DEFB136Q30KP8 78 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 CADM3Q8N126 398 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 POC5Q8NA72 575 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 VSTM2AQ8TAG5 236 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 MARCH1Q8TCQ1 289 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 C4orf3Q8WVX3 66 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 MS4A10Q96PG2 267 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 RTBDNQ9BSG5 229 aaPredicted RBP11.88□□□□□ -0.51
TRIM47-206ENST00000592942 FAM212BQ9NTI7 297 aaPredicted RBP11.88□□□□□ -0.51
TRIM47-206ENST00000592942 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
TRIM47-206ENST00000592942 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
TRIM47-206ENST00000592942 NAP1L6A6NFF2 107 aa11.87□□□□□ -0.51
TRIM47-206ENST00000592942 NUDT19A8MXV4 375 aa11.87□□□□□ -0.51
TRIM47-206ENST00000592942 G3V4G9 280 aa11.87□□□□□ -0.51
TRIM47-206ENST00000592942 CCL24O00175 119 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms