RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TMEM14BQ9NUH8 114 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 SLC39A9Q9NUM3 307 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 TMEM106BQ9NUM4 274 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 ZNRD1Q9P1U0 126 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 PPIAL4AQ9Y536 164 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 PTPRQQ9UMZ3 2332 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 RRHO14718 337 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 IL6RP08887 468 aaPredicted RBP12.9□□□□□ -0.34
MBD1-227ENST00000592060 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 SLC35E3Q7Z769 313 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 OR10G9Q8NGN4 311 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 OR10G7Q8NGN6 311 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 P2RX4Q99571 388 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 GAL3ST2Q9H3Q3 398 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 HEYLQ9NQ87 328 aaPredicted RBP12.9□□□□□ -0.34
MBD1-227ENST00000592060 VAX2Q9UIW0 290 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 VSTM5A8MXK1 200 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 IFNA1P01562 189 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 IFNA10P01566 189 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 CD1BP29016 333 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 MAS1LP35410 378 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 ERVFRD-1P60508 538 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 RPL31P62899 125 aaKnown RBP12.9□□□□□ -0.34
MBD1-227ENST00000592060 HABP2Q14520 560 aaPredicted RBP12.9□□□□□ -0.34
MBD1-227ENST00000592060 TVP23CQ96ET8 276 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 GGACTQ9BVM4 153 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
MBD1-227ENST00000592060 DMXL2Q8TDJ6 3036 aa12.9□□□□□ -0.34
MBD1-227ENST00000592060 A0A087WWC5 75 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 C17orf112F2Z3M2 114 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 NDUFA2O43678 99 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 HOXA1P49639 335 aaPredicted RBP12.89□□□□□ -0.35
MBD1-227ENST00000592060 RAB11AP62491 216 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 DLK1P80370 383 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 ZNF714Q96N38 554 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 PCNX1Q96RV3 2341 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 HRASP01112 189 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 CCL3L1P16619 93 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 UCNP55089 124 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 HSPE1P61604 102 aaKnown RBP12.89□□□□□ -0.35
MBD1-227ENST00000592060 EFNB3Q15768 340 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 CCL17Q92583 94 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 ACTR3CQ9C0K3 210 aaPredicted RBP12.89□□□□□ -0.35
MBD1-227ENST00000592060 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
MBD1-227ENST00000592060 DYNLRB1Q9NP97 96 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 CTSZQ9UBR2 303 aa12.89□□□□□ -0.35
MBD1-227ENST00000592060 OR2C1O95371 312 aa12.88□□□□□ -0.35
MBD1-227ENST00000592060 TAGLN2P37802 199 aaKnown RBP12.88□□□□□ -0.35
MBD1-227ENST00000592060 CA7P43166 264 aa12.88□□□□□ -0.35
MBD1-227ENST00000592060 ZFP82Q8N141 532 aa12.88□□□□□ -0.35
MBD1-227ENST00000592060 ABHD12Q8N2K0 398 aa12.88□□□□□ -0.35
MBD1-227ENST00000592060 FAM24BQ8N5W8 94 aa12.88□□□□□ -0.35
MBD1-227ENST00000592060 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
MBD1-227ENST00000592060 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
MBD1-227ENST00000592060 hCG_1809904A0A1W2PP81 198 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 A0A1W2PR64 198 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 A0A1W2PRV1 198 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 SEC14L6B5MCN3 397 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
MBD1-227ENST00000592060 MPDU1O75352 247 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 RAB5AP20339 215 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 CD81P60033 236 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 ACOT6Q3I5F7 207 aaPredicted RBP12.87□□□□□ -0.35
MBD1-227ENST00000592060 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 OR13D1Q8NGV5 346 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 TMPRSS5Q9H3S3 457 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 ARFGEF3Q5TH69 2177 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
MBD1-227ENST00000592060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.87□□□□□ -0.35
MBD1-227ENST00000592060 TSPAN9O75954 239 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 MYOD1P15172 320 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
MBD1-227ENST00000592060 RAB5BP61020 215 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 RTL8BQ17RB0 113 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 RBMS3Q6XE24 437 aaKnown RBP12.87□□□□□ -0.35
MBD1-227ENST00000592060 C2CD4CQ8TF44 421 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 MALSU1Q96EH3 234 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 MS4A5Q9H3V2 200 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 BIN3Q9NQY0 253 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 KAAG1Q9UBP8 84 aa12.87□□□□□ -0.35
MBD1-227ENST00000592060 ZNF727A8MUV8 499 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 UPK2O00526 184 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 NDUFB3O43676 98 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 SOX15O60248 233 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 NDUFS6O75380 124 aaKnown RBP12.86□□□□□ -0.35
MBD1-227ENST00000592060 IGKV1-16P04430 117 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 CD3EP07766 207 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 AGAP20933 346 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 LOXP28300 417 aaPredicted RBP12.86□□□□□ -0.35
MBD1-227ENST00000592060 DLX6P56179 175 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms