RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ZNRD1Q9P1U0 126 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 TCF19Q9Y242 345 aa16.16■□□□□ 0.18
MBD3-209ENST00000592012 RRHO14718 337 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 MBP02144 154 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 UCNP55089 124 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 PMS2P11Q13670 270 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 TMEM200BQ69YZ2 307 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 Q8N7P7 452 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 LHX4Q969G2 390 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 HIST1H2BAQ96A08 127 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 GAL3ST2Q9H3Q3 398 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 CD1BP29016 333 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 FFAR4Q5NUL3 377 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 MS4A5Q9H3V2 200 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 TMEM14BQ9NUH8 114 aa16.15■□□□□ 0.18
MBD3-209ENST00000592012 NBASA2RRP1 2371 aa16.14■□□□□ 0.18
MBD3-209ENST00000592012 FOLR2P14207 255 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 POU2AF1Q16633 256 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 LYPD2Q6UXB3 125 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 HEPN1Q6WQI6 88 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 ABHD12Q8N2K0 398 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 ZNF709Q8N972 641 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 OR10G9Q8NGN4 311 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 OR10G7Q8NGN6 311 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 CA5BP1Q8WTZ4 195 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 TMEM170AQ8WVE7 144 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 RAB39BQ96DA2 213 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 DYNLRB1Q9NP97 96 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 WDR83OSQ9Y284 106 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 CCL3L1P16619 93 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 APOBEC3AP31941 199 aaPredicted RBP16.14■□□□□ 0.17
MBD3-209ENST00000592012 ZNF714Q96N38 554 aa16.14■□□□□ 0.17
MBD3-209ENST00000592012 FOXA2Q9Y261 457 aaPredicted RBP16.14■□□□□ 0.17
MBD3-209ENST00000592012 A0A1W2PPE2 198 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 PRSS46E5RG02 174 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 HRASP01112 189 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 MT-ND4LP03901 98 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 CA7P43166 264 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 FAM90A2PQ658T7 463 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 NIPSNAP3BQ9BS92 247 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 VAX2Q9UIW0 290 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 PIEZO1Q92508 2521 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 CTXND1A0A1B0GTU2 59 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.13■□□□□ 0.17
MBD3-209ENST00000592012 IGKV1-16P04430 117 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 IL6RP08887 468 aaPredicted RBP16.13■□□□□ 0.17
MBD3-209ENST00000592012 CASP6P55212 293 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 HSPE1P61604 102 aaKnown RBP16.13■□□□□ 0.17
MBD3-209ENST00000592012 RAB11AP62491 216 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 GGACTQ9BVM4 153 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 SLC25A22Q9H936 323 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 ATRXP46100 2492 aa16.13■□□□□ 0.17
MBD3-209ENST00000592012 A0A1W2PPH5 198 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 C17orf112F2Z3M2 114 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 EFNB3Q15768 340 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 TVP23CQ96ET8 276 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 P2RX4Q99571 388 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 ANKHD1Q8IWZ3 2542 aaKnown RBP16.12■□□□□ 0.17
MBD3-209ENST00000592012 HMGB3O15347 200 aaKnown RBP16.12■□□□□ 0.17
MBD3-209ENST00000592012 NDUFB3O43676 98 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 CD3EP07766 207 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 HOXA1P49639 335 aaPredicted RBP16.12■□□□□ 0.17
MBD3-209ENST00000592012 RAB13P51153 203 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 DLK1P80370 383 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 RNF212Q495C1 297 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 ZNF833PQ6ZTB9 187 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 SLC35E3Q7Z769 313 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 LINC01560Q8TB33 94 aa16.12■□□□□ 0.17
MBD3-209ENST00000592012 SRRM4A7MD48 611 aaKnown RBP16.11■□□□□ 0.17
MBD3-209ENST00000592012 LRRC10Q5BKY1 277 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 OR13D1Q8NGV5 346 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 ACTR3CQ9C0K3 210 aaPredicted RBP16.11■□□□□ 0.17
MBD3-209ENST00000592012 TMPRSS5Q9H3S3 457 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 SLC35D1Q9NTN3 355 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 CTSZQ9UBR2 303 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 ABCA4P78363 2273 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 B9A039 149 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 PLAUP00749 431 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 IFNA1P01562 189 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 TAGLN2P37802 199 aaKnown RBP16.11■□□□□ 0.17
MBD3-209ENST00000592012 FBXL19-AS1Q494R0 122 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 TREML4Q6UXN2 200 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 RBMS3Q6XE24 437 aaKnown RBP16.11■□□□□ 0.17
MBD3-209ENST00000592012 FAM24BQ8N5W8 94 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 H1FXQ92522 213 aaKnown RBP16.11■□□□□ 0.17
MBD3-209ENST00000592012 RAB24Q969Q5 203 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 KAAG1Q9UBP8 84 aa16.11■□□□□ 0.17
MBD3-209ENST00000592012 TPRP12270 2363 aaKnown RBP16.1■□□□□ 0.17
MBD3-209ENST00000592012 DVL1O14640 695 aa16.1■□□□□ 0.17
MBD3-209ENST00000592012 RTL8BQ17RB0 113 aa16.1■□□□□ 0.17
MBD3-209ENST00000592012 KLRB1Q12918 225 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 A0A087WWC5 75 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 FAM90A27PA6NNH2 459 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 MPDU1O75352 247 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 OR2C1O95371 312 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 IFNA4P05014 189 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 MYOD1P15172 320 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 GRNP28799 593 aaKnown RBP16.09■□□□□ 0.17
MBD3-209ENST00000592012 ZFP82Q8N141 532 aa16.09■□□□□ 0.17
MBD3-209ENST00000592012 YPEL4Q96NS1 127 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms