RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SNAPC3Q92966 411 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 SLC25A38Q96DW6 304 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 DCUN1D5Q9BTE7 237 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 PTTG2Q9NZH5 202 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 SACSQ9NZJ4 4579 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.64□□□□□ -0.23
H3F3B-209ENST00000589949 FAM223BA6NKX1 122 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 H0Y980 276 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 MPPED1O15442 326 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 OR2A4O95047 310 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 IL6RP08887 468 aaPredicted RBP13.64□□□□□ -0.23
H3F3B-209ENST00000589949 CTXN2P0C2S0 81 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 SDC2P34741 201 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 ATP5G2Q06055 141 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 ARL6IP1Q15041 203 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 ZFAND6Q6FIF0 208 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 SFXN4Q6P4A7 337 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 FAM223AQ8IWN6 122 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 SGPP2Q8IWX5 399 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 SPIN2AQ99865 258 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 SPIN2BQ9BPZ2 258 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 ANXA10Q9UJ72 324 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 SPATA2Q9UM82 520 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 CSMD3Q7Z407 3707 aa13.64□□□□□ -0.23
H3F3B-209ENST00000589949 STARD9Q9P2P6 4700 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 PPP5D1E7EU14 171 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 OR2J3O76001 311 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 HLA-AP01891 365 aaKnown RBP13.63□□□□□ -0.23
H3F3B-209ENST00000589949 MYOD1P15172 320 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 TGFBR1P36897 503 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 TPRA1Q86W33 373 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 MMD2Q8IY49 270 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
H3F3B-209ENST00000589949 GVQW1Q8N7I0 195 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 RHBDL2Q9NX52 303 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 TAS2R8Q9NYW2 309 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 PRELID3BQ9Y3B1 194 aa13.63□□□□□ -0.23
H3F3B-209ENST00000589949 KBTBD11O94819 623 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 AREGP15514 252 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 ZNF182P17025 639 aaPredicted RBP13.62□□□□□ -0.23
H3F3B-209ENST00000589949 GNG2P59768 71 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 MXD1Q05195 221 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 C15orf32Q32M92 178 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 Q8N402 240 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 MFSD4AQ8N468 514 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 NECAP1Q8NC96 275 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 DYNC2LI1Q8TCX1 351 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 TCTEX1D2Q8WW35 142 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 SELENOKQ9Y6D0 94 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 S4R3C0 116 aa13.62□□□□□ -0.23
H3F3B-209ENST00000589949 CGB1A6NKQ9 187 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 ZNF785A8K8V0 405 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 ACTL6BO94805 426 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 FCER2P06734 321 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 TATDN3Q17R31 274 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 CD300EQ496F6 205 aaPredicted RBP13.61□□□□□ -0.23
H3F3B-209ENST00000589949 LINC00322Q6ZN03 302 aaPredicted RBP13.61□□□□□ -0.23
H3F3B-209ENST00000589949 TMEM167AQ8TBQ9 72 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 FANCD2OSQ96PS1 177 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 OR2A7Q96R45 310 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 HSD17B10Q99714 261 aaKnown RBP13.61□□□□□ -0.23
H3F3B-209ENST00000589949 RETNQ9HD89 108 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 CCL28Q9NRJ3 127 aa13.61□□□□□ -0.23
H3F3B-209ENST00000589949 MRPS7Q9Y2R9 242 aaKnown RBP13.61□□□□□ -0.23
H3F3B-209ENST00000589949 TRAV18A0A075B6X5 111 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 TNFSF12O43508 249 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 SLC22A5O76082 557 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 NDUFB8O95169 186 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 OR2C1O95371 312 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 IGHV3-23P01764 117 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 ZNF735P0CB33 412 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 SSX9Q7RTT3 188 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 OR4S2Q8NH73 311 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 FYTTD1Q96QD9 318 aaKnown RBP13.6□□□□□ -0.23
H3F3B-209ENST00000589949 WFDC10AQ9H1F0 79 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 PLEKHA3Q9HB20 300 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 ZNF257Q9Y2Q1 563 aa13.6□□□□□ -0.23
H3F3B-209ENST00000589949 NPIPB5A8MRT5 1133 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 CREBL2O60519 120 aaPredicted RBP13.59□□□□□ -0.23
H3F3B-209ENST00000589949 CD7P09564 240 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 FCGR2CP31995 323 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 RPS19P39019 145 aaKnown RBP13.59□□□□□ -0.23
H3F3B-209ENST00000589949 RPL27AP46776 148 aaKnown RBP13.59□□□□□ -0.23
H3F3B-209ENST00000589949 DEFB114Q30KQ6 69 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 GTSCR1Q86UQ5 136 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 BEST4Q8NFU0 473 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 SPATA25Q9BR10 227 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 SLC2A9Q9NRM0 540 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 PEMTQ9UBM1 199 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 FBXL7Q9UJT9 491 aa13.59□□□□□ -0.23
H3F3B-209ENST00000589949 LCE6AA0A183 80 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 C2orf70A6NJV1 201 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 SCGNO76038 276 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 FOLR2P14207 255 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 KLK9Q2XQG4 91 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 IDNKQ5T6J7 187 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 ZNF66Q6ZN08 573 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 HOGA1Q86XE5 327 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms