RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 ZNF695Q8IW36 515 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 FAM71E2Q8N5Q1 922 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 LRTM2Q8N967 370 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 DMBX1Q8NFW5 382 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 OR5M8Q8NGP6 311 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 COQ8AQ8NI60 647 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 R3HDM4Q96D70 268 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 CHIAQ9BZP6 476 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 CUBNO60494 3623 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 NCBP2LA6PVI3 153 aaKnown RBP9.29□□□□□ -0.92
CDRT1-207ENST00000583965 SRRM4A7MD48 611 aaKnown RBP9.29□□□□□ -0.92
CDRT1-207ENST00000583965 SLC25A17O43808 307 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 GPR137BO60478 399 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 IGKV1-39P01597 117 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 IGKV1D-39P04432 117 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 FGF2P09038 288 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 CNTFRP26992 372 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 EIF2B2P49770 351 aaKnown RBP9.29□□□□□ -0.92
CDRT1-207ENST00000583965 UBA52P62987 128 aaKnown RBP9.29□□□□□ -0.92
CDRT1-207ENST00000583965 C5orf64Q2M2E5 130 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 C2orf68Q2NKX9 166 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 ZFP69Q49AA0 526 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 FAM219AQ8IW50 185 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 SELENOHQ8IZQ5 122 aaKnown RBP9.29□□□□□ -0.92
CDRT1-207ENST00000583965 C5orf56Q8N8D9 126 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 Q8N9W7 124 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 OR4A5Q8NH83 315 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 CASTOR1Q8WTX7 329 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 SEC22AQ96IW7 307 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 RITA1Q96K30 269 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 RANBP3Q9H6Z4 567 aaPredicted RBP9.29□□□□□ -0.92
CDRT1-207ENST00000583965 TNFRSF19Q9NS68 423 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 BET1LQ9NYM9 111 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 SIGLEC9Q9Y336 463 aa9.29□□□□□ -0.92
CDRT1-207ENST00000583965 TRIM77I1YAP6 450 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 GOSR2O14653 212 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 CHST1O43916 411 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 KBTBD11O94819 623 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 KRASP01116 189 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 CRYGBP07316 175 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 SAA1P0DJI8 122 aaPredicted RBP9.28□□□□□ -0.92
CDRT1-207ENST00000583965 G6PCP35575 357 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 AKR1C2P52895 323 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 H2BFSP57053 126 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 PLGLAQ15195 96 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 ANKRD55Q3KP44 614 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 NOXA1Q86UR1 476 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 PPP1R27Q86WC6 154 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 PUSL1Q8N0Z8 303 aaKnown RBP9.28□□□□□ -0.92
CDRT1-207ENST00000583965 LHFPL5Q8TAF8 219 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 LSM10Q969L4 123 aaKnown RBP9.28□□□□□ -0.92
CDRT1-207ENST00000583965 RBMXL1Q96E39 390 aaKnown RBP9.28□□□□□ -0.92
CDRT1-207ENST00000583965 RRNAD1Q96FB5 475 aaKnown RBP9.28□□□□□ -0.92
CDRT1-207ENST00000583965 HYLS1Q96M11 299 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 DUX5Q96PT3 197 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 RASL11BQ9BPW5 248 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 NPFFR1Q9GZQ6 430 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 METTL1Q9UBP6 276 aaKnown RBP9.28□□□□□ -0.92
CDRT1-207ENST00000583965 MMP24Q9Y5R2 645 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
CDRT1-207ENST00000583965 G3V3Q6 166 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 SNAPC5O75971 98 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 HLA-DRB1P01911 266 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 AMY1AP04745 511 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 IL6RP08887 468 aaPredicted RBP9.27□□□□□ -0.93
CDRT1-207ENST00000583965 VDAC1P21796 283 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 OR4A47Q6IF82 309 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 LIN54Q6MZP7 749 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 SSX9Q7RTT3 188 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 MMD2Q8IY49 270 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 VKORC1L1Q8N0U8 176 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 SLC35G3Q8N808 338 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 RNASE11Q8TAA1 199 aaKnown RBP9.27□□□□□ -0.93
CDRT1-207ENST00000583965 TMEM167AQ8TBQ9 72 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 FBXL15Q9H469 300 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 TMEM140Q9NV12 185 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 PRR13Q9NZ81 148 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 TMED3Q9Y3Q3 217 aa9.27□□□□□ -0.93
CDRT1-207ENST00000583965 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 IGKV1-5P01602 117 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 CRYBA1P05813 215 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 P0C879 139 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 MAS1LP35410 378 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 UXS1Q8NBZ7 420 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 OR2T35Q8NGX2 323 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 NMES1Q9C002 83 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 PRSS22Q9GZN4 317 aa9.26□□□□□ -0.93
CDRT1-207ENST00000583965 UPK2O00526 184 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 KCNAB3O43448 404 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 ACTL6BO94805 426 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 IFNA21P01568 189 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 SLC25A6P12236 298 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
CDRT1-207ENST00000583965 CYCSP99999 105 aaKnown RBP9.25□□□□□ -0.93
CDRT1-207ENST00000583965 PRSS8Q16651 343 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 NMSQ5H8A3 153 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 GSG1LQ6UXU4 331 aa9.25□□□□□ -0.93
CDRT1-207ENST00000583965 ZNF562Q6V9R5 426 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms