RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 MRPS7Q9Y2R9 242 aaKnown RBP2.37□□□□□ -2.03
CCDC178-213ENST00000583930 PRRC2CQ9Y520 2896 aaKnown RBP2.37□□□□□ -2.03
CCDC178-213ENST00000583930 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 DCHS2Q6V1P9 2916 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 DNAH7Q8WXX0 4024 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 USP9YO00507 2555 aaPredicted RBP2.37□□□□□ -2.03
CCDC178-213ENST00000583930 FABP12A6NFH5 140 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 UPK2O00526 184 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 HMGB3O15347 200 aaKnown RBP2.37□□□□□ -2.03
CCDC178-213ENST00000583930 TSC22D2O75157 780 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 GSTT2P0CG29 244 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 SULT1A3P0DMM9 295 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 SULT1A4P0DMN0 295 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 OR5H8P0DN80 308 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 GNB3P16520 340 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 SRD5A1P18405 259 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 GPX4P36969 197 aaPredicted RBP2.37□□□□□ -2.03
CCDC178-213ENST00000583930 POLR2GP62487 172 aaKnown RBP eCLIP2.37□□□□□ -2.03
CCDC178-213ENST00000583930 CATR1Q13166 79 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 TAF9Q16594 264 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 TEX38Q6PEX7 206 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 LYG2Q86SG7 212 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 Q8N402 240 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 WFDC9Q8NEX5 89 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 OR5H2Q8NGV7 314 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 CCDC107Q8WV48 283 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 TMEM158Q8WZ71 300 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 USMG5Q96IX5 58 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 ZNF488Q96MN9 340 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 TSC22D3Q99576 134 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 GPR61Q9BZJ8 451 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 SCP2D1Q9UJQ7 156 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 PRNDQ9UKY0 176 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 TP53TG3Q9ULZ0 132 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 FZR1Q9UM11 496 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 PSG11Q9UQ72 335 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 ARL2-SNX15V9GYD0 113 aa2.37□□□□□ -2.03
CCDC178-213ENST00000583930 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 SMG1Q96Q15 3661 aaKnown RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 CORTO00230 105 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 TOMM40O96008 361 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 CFDP00746 253 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 HRASP01112 189 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 IFNA2P01563 188 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 IGKV1-39P01597 117 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 IGKV1D-39P04432 117 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 CD5P06127 495 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 FAM106CPP0CH98 169 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 PSMB8P28062 276 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 SAA4P35542 130 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 TGFBR1P36897 503 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 VDAC2P45880 294 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 PRCDQ00LT1 54 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 AESQ08117 197 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 ZNF345Q14585 488 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 PSG5Q15238 335 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 C5orf64Q2M2E5 130 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 COMMD2Q86X83 199 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 CIARTQ8N365 385 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 OR1L1Q8NH94 360 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 RNASEH2CQ8TDP1 164 aaKnown RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 TMEM203Q969S6 136 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 SMIM8Q96KF7 97 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 SLA2Q9H6Q3 261 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 ZNF581Q9P0T4 197 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 VSIG4Q9Y279 399 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 BOD1L1Q8NFC6 3051 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 TRAV18A0A075B6X5 111 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 IGHV3OR15-7A0A075B7D8 119 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 IGKV1D-13A0A0B4J2D9 117 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 TMEM235A6NFC5 223 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 K7EMT4 169 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 SIRPB1O00241 398 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 VCYO14598 125 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 NBR2O15453 112 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 LYRM1O43325 122 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 MMP23AO75900 390 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 OR7C1O76099 320 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 PAHP00439 452 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 SCTP09683 121 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 IGKV1-13P0DP09 117 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 OR2B8PP59922 312 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 IFITM3Q01628 133 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 EGFEM1PQ0D2K5 195 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 EXOSC2Q13868 293 aaKnown RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 RTL8BQ17RB0 113 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 ATAD3CQ5T2N8 411 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 GPR157Q5UAW9 335 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 TMEM268Q5VZI3 342 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 OTPQ5XKR4 325 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 ZNF818PQ6ZRF7 136 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 MMD2Q8IY49 270 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 SELENOHQ8IZQ5 122 aaKnown RBP2.36□□□□□ -2.03
CCDC178-213ENST00000583930 TCTE3Q8IZS6 198 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 OR2AK2Q8NG84 335 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 LINC00476Q8WZB0 136 aa2.36□□□□□ -2.03
CCDC178-213ENST00000583930 ARL11Q969Q4 196 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms