RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ECSCRQ19T08 205 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 LINC00299Q6ZSB3 139 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 TCTEX1D1Q8N7M0 179 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 LFNGQ8NES3 379 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 GRPEL2Q8TAA5 225 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 MYOZ3Q8TDC0 251 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 CD300LFQ8TDQ1 290 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 TMEM230Q96A57 120 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 KLK15Q9H2R5 256 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 FAM212BQ9NTI7 297 aaPredicted RBP12.82□□□□□ -0.36
RNF43-206ENST00000582293 MCUBQ9NWR8 336 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 COMMD9Q9P000 198 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 VSIG4Q9Y279 399 aa12.82□□□□□ -0.36
RNF43-206ENST00000582293 TNCP24821 2201 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 A0A1W2PRX2 142 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 TCRBV4S1A1TA0A5B7 111 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 CGB1A6NKQ9 187 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 IL7P13232 177 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 RPA2P15927 270 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 NQO2P16083 231 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 FOXE3Q13461 319 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 TNXAQ16473 311 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 NSUN5P1Q3KNT7 163 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 AKIRIN2Q53H80 203 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 TEX38Q6PEX7 206 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 MMD2Q8IY49 270 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 COMMD1Q8N668 190 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 POC5Q8NA72 575 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 VSTM2AQ8TAG5 236 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 SRSF12Q8WXF0 261 aaKnown RBP12.81□□□□□ -0.36
RNF43-206ENST00000582293 R3HDM4Q96D70 268 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 GON7Q9BXV9 100 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 TMEM140Q9NV12 185 aa12.81□□□□□ -0.36
RNF43-206ENST00000582293 TSSC4Q9Y5U2 329 aaPredicted RBP12.81□□□□□ -0.36
RNF43-206ENST00000582293 PKD1L1Q8TDX9 2849 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 A0A1W2PN81 502 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 H0Y980 276 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 UPK2O00526 184 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 ELANEP08246 267 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 G6PCP35575 357 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 CHRNA7P36544 502 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 ECI1P42126 302 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 AP3S2P59780 193 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 RPL23AP62750 156 aaKnown RBP12.8□□□□□ -0.36
RNF43-206ENST00000582293 UNQ5815/PRO19632Q6UWF5 114 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 ADAD2Q8NCV1 583 aaKnown RBP12.8□□□□□ -0.36
RNF43-206ENST00000582293 ABHD5Q8WTS1 349 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 CASTOR1Q8WTX7 329 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 DEDD2Q8WXF8 326 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 SCP2D1Q9UJQ7 156 aa12.8□□□□□ -0.36
RNF43-206ENST00000582293 C3orf85A0A1B0GTC6 90 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 MSGN1A6NI15 193 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 MARCH11A6NNE9 402 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 M0QZ24 198 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 CNIH1O95406 144 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 OR9G9P0C7N8 305 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 BTCP35070 178 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 SP6Q3SY56 376 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
RNF43-206ENST00000582293 OR4A5Q8NH83 315 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 SEC22AQ96IW7 307 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 COPZ2Q9P299 210 aa12.79□□□□□ -0.36
RNF43-206ENST00000582293 FOXA2Q9Y261 457 aaPredicted RBP12.79□□□□□ -0.36
RNF43-206ENST00000582293 CRYM-AS1A6NIL9 109 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 PLA2G10O15496 165 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 KRASP01116 189 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 IGKV1-5P01602 117 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 OPN1MWP04001 364 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 P0C879 139 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 APELAP0DMC3 54 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 OPN1MW2P0DN77 364 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 OPN1MW3P0DN78 364 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 UCP1P25874 307 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 S100GP29377 79 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 FAUP35544 74 aaKnown RBP12.78□□□□□ -0.36
RNF43-206ENST00000582293 TRIQKQ629K1 86 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 CADM3Q8N126 398 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 CCDC71LQ8N9Z2 235 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 LHFPL5Q8TAF8 219 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 NAA60Q9H7X0 242 aa12.78□□□□□ -0.36
RNF43-206ENST00000582293 HMX3A6NHT5 357 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 DBX1A6NMT0 343 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 OR5AC1P0C628 307 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 HLA-GP17693 338 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 MAS1LP35410 378 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 RAB9AP51151 201 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 CCR6P51684 374 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 RPL8P62917 257 aaKnown RBP12.77□□□□□ -0.37
RNF43-206ENST00000582293 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.37
RNF43-206ENST00000582293 TMEM267Q0VDI3 215 aaPredicted RBP12.77□□□□□ -0.37
RNF43-206ENST00000582293 KHDC1LQ5JSQ8 128 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 OR5T1Q8NG75 326 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.37
RNF43-206ENST00000582293 AIFM2Q9BRQ8 373 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms