RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CT45A5P0DMU8 189 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 CT45A7P0DMV0 189 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 PPT1P50897 306 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 GUCA2BQ16661 112 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 TMEM155Q4W5P6 130 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 SPINK9Q5DT21 86 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 OR4A47Q6IF82 309 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 ZNF596Q8TC21 504 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 HEYLQ9NQ87 328 aaPredicted RBP18.53■□□□□ 0.56
CCDC47-204ENST00000582252 TRAV1-1A0A0B4J248 108 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 A0A1W2PPH5 198 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 HOXA1P49639 335 aaPredicted RBP18.52■□□□□ 0.56
CCDC47-204ENST00000582252 VWC2Q2TAL6 325 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 TMEM41BQ5BJD5 291 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 SPSB3Q6PJ21 355 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 CENPVQ7Z7K6 275 aaPredicted RBP18.52■□□□□ 0.56
CCDC47-204ENST00000582252 OR10X1Q8NGY0 326 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 SFT2D1Q8WV19 159 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 TMEM186Q96B77 213 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 ENY2Q9NPA8 101 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 CBLN4Q9NTU7 201 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 PRNDQ9UKY0 176 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 TCF19Q9Y242 345 aa18.52■□□□□ 0.56
CCDC47-204ENST00000582252 C15orf62A8K5M9 175 aa18.52■□□□□ 0.55
CCDC47-204ENST00000582252 IFNA10P01566 189 aa18.52■□□□□ 0.55
CCDC47-204ENST00000582252 MBP02144 154 aa18.52■□□□□ 0.55
CCDC47-204ENST00000582252 RAB11AP62491 216 aa18.52■□□□□ 0.55
CCDC47-204ENST00000582252 OR13D1Q8NGV5 346 aa18.52■□□□□ 0.55
CCDC47-204ENST00000582252 SPOCK3Q9BQ16 436 aa18.52■□□□□ 0.55
CCDC47-204ENST00000582252 SCRT1Q9BWW7 348 aa18.52■□□□□ 0.55
CCDC47-204ENST00000582252 A0A087X0M5 115 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 A0A1B0GX30 115 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 RBFOX3A6NFN3 312 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 A6NNC1 897 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 C17orf112F2Z3M2 114 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 IL3RAP26951 378 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 HSPE1P61604 102 aaKnown RBP18.51■□□□□ 0.55
CCDC47-204ENST00000582252 ZNF709Q8N972 641 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 OSR1Q8TAX0 266 aaPredicted RBP18.51■□□□□ 0.55
CCDC47-204ENST00000582252 GGACTQ9BVM4 153 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 SLC35B3Q9H1N7 401 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 TMEM14BQ9NUH8 114 aa18.51■□□□□ 0.55
CCDC47-204ENST00000582252 A0A1B0GV50 99 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 J3QR06 171 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 IGHV2-70P01814 119 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 PLA2G2AP14555 144 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 FGF7P21781 194 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 VDAC2P45880 294 aaPredicted RBP18.5■□□□□ 0.55
CCDC47-204ENST00000582252 DLX6P56179 175 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 OR9G1Q8NH87 305 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 FKBP11Q9NYL4 201 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 LRBAP50851 2863 aa18.5■□□□□ 0.55
CCDC47-204ENST00000582252 TRAV3A0A0B4J244 114 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 C9JQL5 133 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 SOX15O60248 233 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 COL8A2P25067 703 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 UNKLQ9H9P5 680 aaKnown RBP18.49■□□□□ 0.55
CCDC47-204ENST00000582252 RPRMQ9NS64 109 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 J3QKU1 62 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 DNASE2O00115 360 aaPredicted RBP18.49■□□□□ 0.55
CCDC47-204ENST00000582252 NEU4Q8WWR8 484 aaPredicted RBP18.49■□□□□ 0.55
CCDC47-204ENST00000582252 MBD3L1Q8WWY6 194 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 TNFRSF14Q92956 283 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 BET1LQ9NYM9 111 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 ZNF257Q9Y2Q1 563 aa18.49■□□□□ 0.55
CCDC47-204ENST00000582252 HELZ2Q9BYK8 2649 aaKnown RBP18.49■□□□□ 0.55
CCDC47-204ENST00000582252 IGHV1-8P0DP01 117 aa18.48■□□□□ 0.55
CCDC47-204ENST00000582252 SP5Q6BEB4 398 aaPredicted RBP18.48■□□□□ 0.55
CCDC47-204ENST00000582252 TIMD4Q96H15 378 aa18.48■□□□□ 0.55
CCDC47-204ENST00000582252 MRPL20Q9BYC9 149 aaKnown RBP18.48■□□□□ 0.55
CCDC47-204ENST00000582252 MIOXQ9UGB7 285 aa18.48■□□□□ 0.55
CCDC47-204ENST00000582252 OR51B2Q9Y5P1 312 aa18.48■□□□□ 0.55
CCDC47-204ENST00000582252 USP9YO00507 2555 aaPredicted RBP18.47■□□□□ 0.55
CCDC47-204ENST00000582252 UPK2O00526 184 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 TSPAN4O14817 238 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 MPDU1O75352 247 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 ZNF137PP52743 207 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 ERVFRD-1P60508 538 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 AKAP6Q13023 2319 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 ETV3LQ6ZN32 361 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 PDPNQ86YL7 162 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 OR8B3Q8NGG8 313 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 OR8B2Q96RD0 313 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 PCGF1Q9BSM1 259 aa18.47■□□□□ 0.55
CCDC47-204ENST00000582252 H7C2Y5 167 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 IL6RP08887 468 aaPredicted RBP18.46■□□□□ 0.55
CCDC47-204ENST00000582252 CCL20P78556 96 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 ZNF787Q6DD87 383 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 CLRN3Q8NCR9 226 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 OR5AN1Q8NGI8 311 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 RAB1CQ92928 201 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 TMEM133Q9H2Q1 129 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 DOCK11Q5JSL3 2073 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 LYNX1G3V0Z9 82 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 H0YJW9 148 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 RBP4P02753 201 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 LYNX1P0DP58 116 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 CD1BP29016 333 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 RAB13P51153 203 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 ELLP55199 621 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms