RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ZNF580Q9UK33 172 aa11.91□□□□□ -0.5
MKS1-210ENST00000581180 MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
MKS1-210ENST00000581180 CDS2O95674 445 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 IGF1P05019 195 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 SERPINE2P07093 398 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
MKS1-210ENST00000581180 CRIP2P52943 208 aaPredicted RBP11.9□□□□□ -0.5
MKS1-210ENST00000581180 UBE2MP61081 183 aaKnown RBP11.9□□□□□ -0.5
MKS1-210ENST00000581180 TMEM187Q14656 261 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 OR4A5Q8NH83 315 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 LHFPL5Q8TAF8 219 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 TMEM140Q9NV12 185 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 FBXO7Q9Y3I1 522 aa11.9□□□□□ -0.5
MKS1-210ENST00000581180 TRAV3A0A0B4J244 114 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 FAM240BA0A1B0GVZ2 78 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 AP4M1O00189 453 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 UPK2O00526 184 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 ATP6V0E1O15342 81 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 KRASP01116 189 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 P0C879 139 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 G6PCP35575 357 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 ERVK-16P61578 105 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
MKS1-210ENST00000581180 MMD2Q8IY49 270 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 STPG2Q8N412 459 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 DMBX1Q8NFW5 382 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
MKS1-210ENST00000581180 C20orf85Q9H1P6 137 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 LINC00527Q9UJ94 153 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 KCNIP3Q9Y2W7 256 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 TMEM56-RWDD3S4R434 201 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 TENM1Q9UKZ4 2725 aa11.89□□□□□ -0.51
MKS1-210ENST00000581180 SFT2D2O95562 160 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 IGKV1-5P01602 117 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 FGF2P09038 288 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 KRTAP10-3P60369 221 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 PPP1R1AQ13522 171 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 FXYD3Q14802 87 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 TRIM16LQ309B1 348 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 C19orf54Q5BKX5 351 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 FOXRED2Q8IWF2 684 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 SELENOHQ8IZQ5 122 aaKnown RBP11.88□□□□□ -0.51
MKS1-210ENST00000581180 KLHDC1Q8N7A1 406 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 DUSP18Q8NEJ0 188 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 ALX4Q9H161 411 aaPredicted RBP11.88□□□□□ -0.51
MKS1-210ENST00000581180 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
MKS1-210ENST00000581180 HAX1O00165 279 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 CREBL2O60519 120 aaPredicted RBP11.87□□□□□ -0.51
MKS1-210ENST00000581180 OR9G9P0C7N8 305 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 ANXA7P20073 488 aaKnown RBP11.87□□□□□ -0.51
MKS1-210ENST00000581180 MAS1LP35410 378 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 MECP2P51608 486 aaKnown RBP11.87□□□□□ -0.51
MKS1-210ENST00000581180 DEFA1P59665 94 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 DEFA3P59666 94 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
MKS1-210ENST00000581180 CFHR3Q02985 330 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 TNXAQ16473 311 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 NRARPQ7Z6K4 114 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 SGMS2Q8NHU3 365 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 CHPT1Q8WUD6 406 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 IL22RA2Q969J5 263 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 FAM103A1Q9BTL3 118 aaKnown RBP11.87□□□□□ -0.51
MKS1-210ENST00000581180 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 PARP11Q9NR21 331 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 NUDT15Q9NV35 164 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 PRR13Q9NZ81 148 aa11.87□□□□□ -0.51
MKS1-210ENST00000581180 TRAV6A0A075B6T7 132 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 G3V318 75 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 OR4E1P0C645 316 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 ANXA3P12429 323 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 GNB1P62873 340 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 ANKRD55Q3KP44 614 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 C10orf55Q5SWW7 151 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 C12orf54Q6X4T0 127 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 H2BFWTQ7Z2G1 175 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 LRTM2Q8N967 370 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 ENKURQ8TC29 256 aa11.86□□□□□ -0.51
MKS1-210ENST00000581180 SRSF12Q8WXF0 261 aaKnown RBP11.86□□□□□ -0.51
MKS1-210ENST00000581180 RBPMSQ93062 196 aaKnown RBP11.86□□□□□ -0.51
MKS1-210ENST00000581180 A0A0G2JRQ6 117 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 A0A1B0GW64 132 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 C9orf170A2RU37 121 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 PSMB11A5LHX3 300 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 CGB1A6NKQ9 187 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 E7EUB6 86 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 ATG12O94817 140 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 CNIH1O95406 144 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 H2AFB2P0C5Z0 115 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 MYOD1P15172 320 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 HLA-GP17693 338 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 VAMP1P23763 118 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 PPIFP30405 207 aaKnown RBP11.85□□□□□ -0.51
MKS1-210ENST00000581180 SRPXP78539 464 aa11.85□□□□□ -0.51
MKS1-210ENST00000581180 DHRS2Q13268 280 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms