RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TEX45Q8NA69 505 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 COQ8AQ8NI60 647 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 VSTM2AQ8TAG5 236 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 ZNF431Q8TF32 576 aaPredicted RBP9.64□□□□□ -0.87
IFT20-207ENST00000578547 RRNAD1Q96FB5 475 aaKnown RBP9.64□□□□□ -0.87
IFT20-207ENST00000578547 SEC22AQ96IW7 307 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 TMEM56Q96MV1 263 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 OR2A7Q96R45 310 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 PHB2Q99623 299 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 RANBP3Q9H6Z4 567 aaPredicted RBP9.64□□□□□ -0.87
IFT20-207ENST00000578547 GPN1Q9HCN4 374 aaPredicted RBP9.64□□□□□ -0.87
IFT20-207ENST00000578547 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
IFT20-207ENST00000578547 TRAV3A0A0B4J244 114 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 FCN1O00602 326 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 CREBL2O60519 120 aaPredicted RBP9.63□□□□□ -0.87
IFT20-207ENST00000578547 PRAF2O60831 178 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 CA2P00918 260 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 IL5P05113 134 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 CRYGBP07316 175 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 HOXB5P09067 269 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 OR9G9P0C7N8 305 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 RAG2P55895 527 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 RIPPLY3P57055 190 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 OR2B8PP59922 312 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 POU2AF1Q16633 256 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 PRSS8Q16651 343 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 TATDN3Q17R31 274 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 PPP1R27Q86WC6 154 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 PUSL1Q8N0Z8 303 aaKnown RBP9.63□□□□□ -0.87
IFT20-207ENST00000578547 TMEM167AQ8TBQ9 72 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 ABHD5Q8WTS1 349 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 CHPT1Q8WUD6 406 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 IL22RA2Q969J5 263 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 HSPB9Q9BQS6 159 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 PRSS22Q9GZN4 317 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 ZNF430Q9H8G1 570 aaPredicted RBP9.63□□□□□ -0.87
IFT20-207ENST00000578547 NSG2Q9Y328 171 aa9.63□□□□□ -0.87
IFT20-207ENST00000578547 A0A0B4J293 547 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 A0A0B4J2A0 478 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 A0A0G2JRQ6 117 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 UPK2O00526 184 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 RBMXL2O75526 392 aaKnown RBP9.62□□□□□ -0.87
IFT20-207ENST00000578547 SNAPC5O75971 98 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 ACTL6BO94805 426 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 CNIH1O95406 144 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 HLA-DRB1P01911 266 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 TNXAQ16473 311 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 Q6ZS46 218 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 C12orf45Q8N5I9 185 aaPredicted RBP9.62□□□□□ -0.87
IFT20-207ENST00000578547 MINDY2Q8NBR6 621 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 GRPEL2Q8TAA5 225 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 MITD1Q8WV92 249 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 ZNF702PQ9H963 129 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 PARP11Q9NR21 331 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 BET1LQ9NYM9 111 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 SHPKQ9UHJ6 478 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 MMP24Q9Y5R2 645 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 ALG5Q9Y673 324 aa9.62□□□□□ -0.87
IFT20-207ENST00000578547 CCSO14618 274 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 SSNA1O43805 119 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 ADAP1O75689 374 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 OPN1MWP04001 364 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 OPN1MW2P0DN77 364 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 OPN1MW3P0DN78 364 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 MYOD1P15172 320 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 HLA-GP17693 338 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 RPL15P61313 204 aaKnown RBP9.61□□□□□ -0.87
IFT20-207ENST00000578547 RPL8P62917 257 aaKnown RBP9.61□□□□□ -0.87
IFT20-207ENST00000578547 CX3CL1P78423 397 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 MRGPRG-AS1Q2M3A8 158 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 C10orf55Q5SWW7 151 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 Q6ZSV7 163 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 SLC35E3Q7Z769 313 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 MMD2Q8IY49 270 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.61□□□□□ -0.87
IFT20-207ENST00000578547 LRTM2Q8N967 370 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 OR4A16Q8NH70 328 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 OR4A5Q8NH83 315 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 GPR146Q96CH1 333 aa9.61□□□□□ -0.87
IFT20-207ENST00000578547 IGHV7-81A0A0B4J1V7 117 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 LINC01548A6NM66 108 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 SNRPGP15A8MWD9 76 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 NXPH3O95157 252 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 IFNA21P01568 189 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 P0C879 139 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 VDAC1P21796 283 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 VDAC2P45880 294 aaPredicted RBP9.6□□□□□ -0.87
IFT20-207ENST00000578547 NDPQ00604 133 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 RELBQ01201 579 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 FXYD3Q14802 87 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 KRTAP24-1Q3LI83 254 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 NMSQ5H8A3 153 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 FAM219AQ8IW50 185 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 OR2T6Q8NHC8 308 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
IFT20-207ENST00000578547 LSM10Q969L4 123 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms